Homologs in group_2265

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17425 FBDBKF_17425 94.1 Morganella morganii S1 brnQ branched-chain amino acid transport system II carrier protein
EHELCC_17320 EHELCC_17320 94.1 Morganella morganii S2 brnQ branched-chain amino acid transport system II carrier protein
NLDBIP_17875 NLDBIP_17875 94.1 Morganella morganii S4 brnQ branched-chain amino acid transport system II carrier protein
LHKJJB_17795 LHKJJB_17795 94.1 Morganella morganii S3 brnQ branched-chain amino acid transport system II carrier protein
HKOGLL_17805 HKOGLL_17805 94.1 Morganella morganii S5 brnQ branched-chain amino acid transport system II carrier protein
PMI_RS00260 PMI_RS00260 74.9 Proteus mirabilis HI4320 brnQ branched-chain amino acid transport system II carrier protein

Distribution of the homologs in the orthogroup group_2265

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2265

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AD99 0.0 587 67 2 435 1 brnQ Branched-chain amino acid permease BrnQ Escherichia coli (strain K12)
P0ADA0 0.0 587 67 2 435 3 brnQ Branched-chain amino acid permease BrnQ Escherichia coli O157:H7
P0A1W8 0.0 582 66 2 435 3 brnQ Branched-chain amino acid permease BrnQ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1W9 0.0 582 66 2 435 3 brnQ Branched-chain amino acid permease BrnQ Salmonella typhi
P25185 0.0 524 61 3 437 3 braZ Branched-chain amino acid transport system 3 carrier protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P19072 3.23e-146 426 51 3 439 3 braB Branched-chain amino acid transport system 2 carrier protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O34545 6.45e-89 280 38 3 440 1 braB Branched-chain amino acid permease BraB Bacillus subtilis (strain 168)
P94499 1.82e-87 276 38 4 424 1 brnQ Branched-chain amino acid permease BrnQ Bacillus subtilis (strain 168)
P71345 2.43e-69 229 33 7 432 3 brnQ Branched-chain amino acid permease BrnQ Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q49XK9 2.39e-67 224 32 12 457 3 SSP1343 Putative branched-chain amino acid carrier protein SSP1343 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q7A0W9 2.93e-67 224 32 12 455 3 MW1297 Putative branched-chain amino acid carrier protein MW1297 Staphylococcus aureus (strain MW2)
Q6G9F4 2.93e-67 224 32 12 455 3 SAS1350 Putative branched-chain amino acid carrier protein SAS1350 Staphylococcus aureus (strain MSSA476)
Q7A5N9 2.93e-67 224 32 12 455 3 SA1239 Putative branched-chain amino acid carrier protein SA1239 Staphylococcus aureus (strain N315)
Q99U80 2.93e-67 224 32 12 455 3 SAV1407 Putative branched-chain amino acid carrier protein SAV1407 Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HG12 2.93e-67 224 32 12 455 3 SACOL1443 Putative branched-chain amino acid carrier protein SACOL1443 Staphylococcus aureus (strain COL)
Q2FYM4 2.93e-67 224 32 12 455 3 SAOUHSC_01411 Putative branched-chain amino acid carrier protein SAOUHSC_01411 Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FH31 2.93e-67 224 32 12 455 3 SAUSA300_1300 Putative branched-chain amino acid carrier protein SAUSA300_1300 Staphylococcus aureus (strain USA300)
Q6GH01 3.43e-67 224 32 12 458 3 SAR1419 Putative branched-chain amino acid carrier protein SAR1419 Staphylococcus aureus (strain MRSA252)
Q4L6B4 3.43e-66 221 31 13 453 3 SH1502 Putative branched-chain amino acid carrier protein SH1502 Staphylococcus haemolyticus (strain JCSC1435)
Q2YY11 6.08e-66 221 32 12 455 3 SAB1263c Putative branched-chain amino acid carrier protein SAB1263c Staphylococcus aureus (strain bovine RF122 / ET3-1)
P54104 9.17e-61 207 32 6 443 1 brnQ Branched-chain amino acid permease BrnQ Lactobacillus delbrueckii subsp. lactis
Q8CP86 3.17e-59 203 30 9 455 3 SE_1090 Putative branched-chain amino acid carrier protein SE_1090 Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HPD5 3.08e-58 200 30 9 455 3 SERP0977 Putative branched-chain amino acid carrier protein SERP0977 Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
A2RJ04 2.75e-57 198 35 8 434 1 brnQ Branched-chain amino acid permease BrnQ Lactococcus lactis subsp. cremoris (strain MG1363)
O06754 4.59e-55 191 31 8 448 1 brnQ Branched-chain amino acid permease BrnQ Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16600
Feature type CDS
Gene brnQ
Product branched-chain amino acid transport system II carrier protein
Location 139312 - 140643 (strand: -1)
Length 1332 (nucleotides) / 443 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2265
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF05525 Branched-chain amino acid transport protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1114 Amino acid transport and metabolism (E) E Branched-chain amino acid permease

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03311 branched-chain amino acid:cation transporter, LIVCS family - -

Protein Sequence

MAHRLTSRDILALGFMTFALFVGAGNIIFPPMVGLQAGEMVWTAAAGFLITGVGLPVLTVVALAKVGGGVEALSSPVGKYAGLLLAFVAYMSVGPLFATPRTATVSYKIGIAPLVGGESDISLLIYSLVYFACVIGISLYPGKLLDSVGHVLAPVKMLALAILGIAAVMWPAGDPIMATPEYKEMAFSNGFINGYLTMDTLGAMVFGIVIVNAARSRGVENSSLLTRYTMWAGLIAGVLLTLVYLALFKLGENSGSIIPNPADGAEILHEYVQYTFGNYGSFFLAVLIFVACMVTAIGLTCACAEFFSRYLPISYRPLVLILGGFSMVISNLGLSKLIAFSYPVLVSIYPPCIVLILLSFTLRFWKKPGRVVAPAMLVSVIVGTMGALNATKIFNPYIPSWIESLPFYKYDLAWLAPTLAVLVVSIVIDRVMGAEPETVQKHA

Flanking regions ( +/- flanking 50bp)

ATTTTCATTAAATAGTTAACATTAAACTAACAATAACAGACAAAAATAATATGGCGCATCGTTTAACTTCGAGAGATATTTTAGCCTTAGGTTTTATGACCTTTGCGCTCTTTGTCGGGGCAGGGAATATTATATTTCCGCCAATGGTCGGATTACAGGCCGGTGAAATGGTCTGGACGGCAGCAGCCGGCTTTCTGATAACCGGCGTCGGCTTACCGGTACTGACTGTAGTTGCACTGGCAAAGGTCGGTGGAGGCGTTGAGGCGCTCAGTTCGCCTGTGGGGAAATATGCCGGGCTGTTGCTGGCATTTGTAGCGTATATGTCTGTCGGTCCGCTTTTTGCGACACCACGCACAGCAACCGTATCTTATAAAATCGGGATCGCGCCGCTGGTCGGCGGGGAATCTGATATTTCACTGCTTATCTACAGCCTTGTCTATTTTGCCTGTGTGATCGGCATTTCATTGTATCCGGGTAAATTGCTGGACAGCGTCGGGCACGTACTTGCACCGGTAAAAATGCTGGCGCTGGCAATCCTGGGTATTGCGGCTGTGATGTGGCCTGCCGGTGACCCGATTATGGCAACGCCGGAATACAAAGAAATGGCGTTTTCCAACGGATTTATCAATGGTTATCTGACCATGGATACTCTGGGTGCGATGGTTTTCGGTATTGTGATAGTGAATGCCGCACGTTCGCGCGGAGTGGAAAACTCCTCTCTTCTGACCCGTTACACCATGTGGGCGGGGCTGATTGCCGGTGTTCTGCTGACCTTGGTTTATCTGGCACTGTTTAAGTTAGGGGAAAACAGCGGGTCAATTATCCCGAATCCGGCAGATGGCGCAGAAATTTTACATGAGTATGTGCAGTATACCTTCGGCAACTACGGCAGTTTCTTCCTTGCGGTACTGATTTTTGTCGCCTGTATGGTAACGGCGATTGGCCTGACCTGTGCCTGTGCGGAGTTCTTCAGTCGTTATCTGCCCATTTCGTACCGGCCACTGGTGTTGATCCTCGGCGGTTTCTCTATGGTGATTTCAAACCTGGGACTGAGCAAACTGATTGCATTTTCCTATCCGGTACTGGTATCGATTTATCCACCATGTATTGTGCTGATTTTACTCAGCTTCACATTGAGATTCTGGAAGAAACCGGGCCGTGTGGTTGCACCTGCGATGCTGGTCAGCGTGATTGTCGGCACGATGGGCGCACTGAATGCGACCAAGATATTCAACCCTTATATACCGTCATGGATTGAGTCATTGCCGTTTTATAAATATGATCTGGCATGGCTTGCGCCGACACTCGCAGTACTGGTTGTGTCCATTGTGATTGACCGGGTGATGGGTGCGGAGCCGGAGACGGTTCAGAAACACGCCTGACAAAATGATGACTTACAGAAAATACTCTGCTCCGGCGGAGTATTTTTTTA