Orthogroup:group_2300


Homologs in group_2300

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17680 FBDBKF_17680 Morganella morganii S1 hemE uroporphyrinogen decarboxylase
EHELCC_18165 EHELCC_18165 Morganella morganii S2 hemE uroporphyrinogen decarboxylase
NLDBIP_17985 NLDBIP_17985 Morganella morganii S4 hemE uroporphyrinogen decarboxylase
LHKJJB_18180 LHKJJB_18180 Morganella morganii S3 hemE uroporphyrinogen decarboxylase
HKOGLL_18020 HKOGLL_18020 Morganella morganii S5 hemE uroporphyrinogen decarboxylase
F4V73_RS15060 F4V73_RS15060 Morganella psychrotolerans hemE uroporphyrinogen decarboxylase
PMI_RS13700 PMI_RS13700 Proteus mirabilis HI4320 hemE uroporphyrinogen decarboxylase

Distribution of group_2300 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2300 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2300

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2300.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hemE 7

Product

# Product Occurence
1 uroporphyrinogen decarboxylase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0407 7 H Coenzyme transport and metabolism (H) Uroporphyrinogen-III decarboxylase HemE

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01208 7 Uroporphyrinogen decarboxylase (URO-D)

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG013200 6 uroporphyrinogen decarboxylase VF0758 Nutritional/Metabolic factor
VFG013612 1 uroporphyrinogen decarboxylase VF0758 Nutritional/Metabolic factor

Annotations of the 500 SwissProt hits

Annotation Number of occurrences
Uroporphyrinogen decarboxylase 492
Uroporphyrinogen decarboxylase (Fragment) 2
Uroporphyrinogen decarboxylase 1, chloroplastic 2
Uroporphyrinogen decarboxylase 2, chloroplastic 2
Uroporphyrinogen decarboxylase, chloroplastic 2

Protein length

Min length 355
Max length 357
Mean length (sd) 355.3 (0.8)
Median length 355.0

Protein length distribution