Homologs in group_2122

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15940 FBDBKF_15940 84.3 Morganella morganii S1 amtB ammonium transporter AmtB
EHELCC_18540 EHELCC_18540 84.3 Morganella morganii S2 amtB ammonium transporter AmtB
NLDBIP_17375 NLDBIP_17375 84.3 Morganella morganii S4 amtB ammonium transporter AmtB
LHKJJB_17285 LHKJJB_17285 84.3 Morganella morganii S3 amtB ammonium transporter AmtB
HKOGLL_17110 HKOGLL_17110 84.3 Morganella morganii S5 amtB ammonium transporter AmtB
PMI_RS00615 PMI_RS00615 64.3 Proteus mirabilis HI4320 amtB ammonium transporter AmtB

Distribution of the homologs in the orthogroup group_2122

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2122

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P69681 0.0 560 65 1 429 1 amtB Ammonium transporter AmtB Escherichia coli (strain K12)
P69680 0.0 560 65 1 429 1 amtB Ammonium transporter AmtB Escherichia coli O157:H7
O66515 1.45e-105 322 44 8 427 1 amt Ammonium transporter Aquifex aeolicus (strain VF5)
O26759 4.51e-104 318 47 5 406 3 MTH_663 Putative ammonium transporter MTH_663 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Q07429 4.07e-102 312 45 5 403 1 nrgA Ammonium transporter Bacillus subtilis (strain 168)
O28525 5.31e-95 293 44 7 398 3 amt3 Ammonium transporter Amt3 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
O26757 2e-89 280 43 7 410 3 MTH_661 Putative ammonium transporter MTH_661 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
O29285 5.96e-87 273 41 9 398 1 amt1 Ammonium transporter Amt1 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q9BLG4 3.31e-70 232 35 8 416 1 amtA Ammonium transporter 1 Dictyostelium discoideum
P9WQ65 6.2e-70 231 39 8 434 3 amt Ammonium transporter Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WQ64 6.2e-70 231 39 8 434 3 amt Ammonium transporter Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P63520 6.2e-70 231 39 8 434 3 amt Ammonium transporter Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P41948 2.94e-69 230 36 9 423 1 MEP2 Ammonium transporter MEP2 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9C0V1 7.59e-69 229 36 8 412 3 amt1 Ammonium transporter 1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P53390 2.08e-65 220 34 9 421 1 MEP3 Ammonium transporter MEP3 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P54146 4.2e-65 218 35 12 419 2 amt Ammonium transporter Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q9US00 1.38e-64 218 36 12 424 3 amt2 Ammonium transporter 2 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
G7L1W7 1.19e-63 215 33 8 429 2 AMT2-4 Ammonium transporter 2 member 4 Medicago truncatula
P40260 1.25e-62 213 34 9 407 1 MEP1 Ammonium transporter MEP1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
G7LAA8 2.51e-62 212 33 9 423 2 AMT2-3 Ammonium transporter 2 member 3 Medicago truncatula
P54147 1e-60 208 35 11 406 3 sll0108 Putative ammonium transporter sll0108 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9M6N7 1.94e-60 206 32 9 429 1 AMT2 Ammonium transporter 2 Arabidopsis thaliana
A0A072VHJ1 4.39e-58 201 33 8 436 2 AMT2-5 Ammonium transporter 2 member 5 Medicago truncatula
Q84KJ6 7.59e-58 200 31 7 441 2 AMT3-1 Ammonium transporter 3 member 1 Oryza sativa subsp. japonica
Q69T29 3.97e-56 195 31 5 431 2 AMT3-3 Ammonium transporter 3 member 3 Oryza sativa subsp. japonica
Q8S230 8.29e-56 195 30 8 435 2 AMT2-2 Ammonium transporter 2 member 2 Oryza sativa subsp. japonica
Q851M9 1.63e-52 186 31 4 431 2 AMT3-2 Ammonium transporter 3 member 2 Oryza sativa subsp. japonica
Q8S233 4.7e-52 185 30 8 433 2 AMT2-3 Ammonium transporter 2 member 3 Oryza sativa subsp. japonica
Q84KJ7 6.97e-52 184 30 8 447 2 AMT2-1 Ammonium transporter 2 member 1 Oryza sativa subsp. japonica
Q9P7F3 5.66e-49 177 29 10 483 3 amt3 Ammonium transporter 3 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9FVN0 1.57e-41 156 30 11 448 2 AMT1-3 Ammonium transporter 1 member 3 Solanum lycopersicum
O28528 1.73e-41 156 31 10 419 3 amt2 Ammonium transporter Amt2 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
P54144 3.59e-41 155 30 13 435 1 AMT1-1 Ammonium transporter 1 member 1 Arabidopsis thaliana
P72935 4.81e-40 151 32 10 407 3 sll1017 Putative ammonium transporter sll1017 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9ZPJ8 5.39e-40 152 30 16 438 1 AMT1-2 Ammonium transporter 1 member 2 Arabidopsis thaliana
Q7XQ12 3.52e-39 150 31 15 437 2 AMT1-1 Ammonium transporter 1 member 1 Oryza sativa subsp. japonica
Q9SVT8 2.06e-38 148 30 15 447 1 AMT1-4 Ammonium transporter 1 member 4 Arabidopsis thaliana
Q9LK16 6.72e-38 147 29 13 435 3 AMT1-5 Putative ammonium transporter 1 member 5 Arabidopsis thaliana
B8ZYW3 1.01e-37 145 30 11 410 2 amt2 Ammonium transporter Amt2 Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4)
Q9SQH9 1.85e-37 145 30 14 436 1 AMT1-3 Ammonium transporter 1 member 3 Arabidopsis thaliana
Q6K9G1 1.99e-37 145 29 15 439 2 AMT1-2 Ammonium transporter 1 member 2 Oryza sativa subsp. japonica
I3R0S7 2.21e-37 145 32 11 433 1 amt1 Ammonium transporter Amt1 Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4)
Q60366 7.49e-37 142 30 12 422 1 amt1 Ammonium transporter Amt1 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q9BLG3 4.33e-36 140 30 15 422 1 amtB Ammonium transporter 2 Dictyostelium discoideum
O04161 6.2e-36 141 28 13 440 2 AMT1-2 Ammonium transporter 1 member 2 Solanum lycopersicum
P58905 1.54e-35 140 29 16 440 2 AMT1-1 Ammonium transporter 1 member 1 Solanum lycopersicum
Q6K9G3 1.17e-34 137 28 18 456 2 AMT1-3 Ammonium transporter 1 member 3 Oryza sativa subsp. japonica
Q58739 4.26e-34 135 29 11 408 1 amt2 Ammonium transporter Amt2 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P54145 5.41e-32 130 27 12 430 3 amt-1 Putative ammonium transporter 1 Caenorhabditis elegans
P54148 1.64e-31 129 31 9 413 3 sll0537 Putative ammonium transporter sll0537 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q8MXY0 5.59e-31 126 28 11 418 2 amtC Ammonium transporter 3 Dictyostelium discoideum
Q21565 3.32e-23 105 26 14 435 3 amt-3 Putative ammonium transporter 3 Caenorhabditis elegans
Q20605 1.24e-15 82 25 19 438 3 amt-2 Putative ammonium transporter 2 Caenorhabditis elegans
Q5U4V1 3.29e-09 62 25 7 222 2 rhcg Ammonium transporter Rh type C Xenopus laevis
Q10CV4 1.19e-08 59 31 4 155 3 AMT4-1 Putative ammonium transporter 4 member 1 Oryza sativa subsp. japonica
Q95JD3 1.59e-08 60 27 5 187 2 RHCG Ammonium transporter Rh type C Oryctolagus cuniculus
Q8JI14 4.96e-08 58 29 6 179 2 rhcgl2 Ammonium transporter Rh type C-like 2 Danio rerio
Q3BCQ4 8.38e-08 57 26 5 182 2 RHCG Ammonium transporter Rh type C Canis lupus familiaris
Q4VUZ1 1.52e-07 57 28 8 197 2 rhcg Ammonium transporter Rh type C Oncorhynchus mykiss
Q3BCQ5 1.56e-07 57 29 7 179 2 RHAG Ammonium transporter Rh type A Canis lupus familiaris
Q19KI0 1.92e-07 56 27 6 187 2 RHCG Ammonium transporter Rh type C Sus scrofa
Q95M75 3.14e-07 56 27 7 201 2 RHBG Ammonium transporter Rh type B Sus scrofa
Q19KH7 3.47e-07 55 24 8 269 2 rhcg Ammonium transporter Rh type C Gasterosteus aculeatus
Q7T3R4 5.92e-07 55 25 9 272 1 rhcg2 Ammonium transporter Rh type C 2 Takifugu rubripes
Q7TNN9 8.46e-07 54 24 7 240 1 Rhcg Ammonium transporter Rh type C Rattus norvegicus
Q6XL41 1.1e-06 54 25 8 214 2 RHCG Ammonium transporter Rh type C Gallus gallus
Q6WRY0 1.7e-06 53 25 7 215 2 rhcg Ammonium transporter Rh type C Xenopus tropicalis
Q4VUI0 1.91e-06 53 28 8 196 2 RHBG Ammonium transporter Rh type B Canis lupus familiaris
Q18PF5 2.19e-06 53 27 8 197 2 rhcg1 Ammonium transporter Rh type C 1 Takifugu rubripes
Q18PF6 3.29e-06 52 25 12 278 1 rhbg Ammonium transporter Rh type B Takifugu rubripes
Q3BBX8 3.37e-06 52 26 6 190 2 rhbg Ammonium transporter Rh type B Tetraodon nigroviridis
Q9GKN7 3.49e-06 52 23 7 233 2 RHAG Ammonium transporter Rh type A Bos taurus
Q2T9S6 5.59e-06 52 27 5 169 2 RHCG Ammonium transporter Rh type C Bos taurus
Q9NIV0 8.79e-06 51 27 7 180 1 rhgA Rhesus-like glycoprotein A Dictyostelium discoideum
Q9H310 9.04e-06 51 25 13 329 1 RHBG Ammonium transporter Rh type B Homo sapiens
Q8WMW2 1.33e-05 50 28 7 197 3 RHBG Ammonium transporter Rh type B Gorilla gorilla gorilla
Q9QXP0 1.6e-05 50 25 5 171 1 Rhcg Ammonium transporter Rh type C Mus musculus
Q8WNQ6 2.17e-05 50 25 13 329 3 RHBG Ammonium transporter Rh type B Macaca mulatta
Q8WNQ5 2.23e-05 50 25 12 327 3 RHBG Ammonium transporter Rh type B Papio hamadryas
Q95M74 2.5e-05 50 28 8 199 2 RHBG Ammonium transporter Rh type B Pan troglodytes
Q0IIV2 2.51e-05 50 28 6 182 2 rhbg Ammonium transporter Rh type B Xenopus tropicalis
Q8I0L6 2.58e-05 50 25 10 265 2 rhgB Rhesus-like glycoprotein B Dictyostelium discoideum
Q95JD4 2.93e-05 49 27 9 209 2 RHBG Ammonium transporter Rh type B Oryctolagus cuniculus
Q6DCG4 4.1e-05 49 27 6 182 2 rhbg-b Ammonium transporter Rh type B-B Xenopus laevis
Q3BBX7 6.04e-05 48 27 7 199 2 rhcg Ammonium transporter Rh type C Tetraodon nigroviridis
Q02094 6.59e-05 48 26 10 238 1 RHAG Ammonium transporter Rh type A Homo sapiens
Q7T070 6.69e-05 48 27 8 194 2 rhbg Ammonium transporter Rh type B Danio rerio
Q9QUT0 9.64e-05 48 26 6 163 1 Rhag Ammonium transporter Rh type A Mus musculus
Q69D48 0.000109 48 27 6 182 2 rhbg-a Ammonium transporter Rh type B-A Xenopus laevis
Q8BUX5 0.00017 47 25 6 200 1 Rhbg Ammonium transporter Rh type B Mus musculus
Q68FT6 0.000239 47 25 7 204 1 Rhbg Ammonium transporter Rh type B Rattus norvegicus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16370
Feature type CDS
Gene amtB
Product ammonium transporter AmtB
Location 89949 - 91244 (strand: -1)
Length 1296 (nucleotides) / 431 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2122
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00909 Ammonium Transporter Family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0004 Inorganic ion transport and metabolism (P) P Ammonia channel protein AmtB

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03320 ammonium transporter, Amt family - -

Protein Sequence

MKQGIIYRGLTGAISAMLPVFGYSETAGADRADNGFMLISAALVYFMTLPGIALFYGGLVRRENVLSVMTQVIVSFSLVLLLWVFYGYSMAFSGGNGFTGYLSYAFLSGITIESTSGSISLLTHVLFQGSFAAITVALITGALAERIRFTAFLLFVVIWFSLAYVPMAHMVWGGGWLAEKGALDFAGGTVVHINAAVAGLVGAYLLGPRLARGKSAAKPHSLPMVFTGTAILYVGWFGFNAGSAGKADGTAALAFINTVLAVAGGVLAWVVAEWSIRGKPSLLGACSGCIGGLVGITPAAGTVGVCGAIVIGLVSGVAGYWGVTVLKRRLKVDDVCDVFGIHGVCGIIGCLLTGVFTAEALGGTGYAEGVTMLRQLWVQTESIVVTVIWSGVIAYIAFKLAALTVGLRCTADDEISGLDISSHGERAYNRS

Flanking regions ( +/- flanking 50bp)

GAACAAAATGATGACGCACTCTAAACCGCGCAGAGGTGATACAGATGACAATGAAACAAGGGATCATTTACAGGGGCCTCACCGGCGCAATATCTGCCATGCTTCCTGTCTTCGGTTACAGTGAAACCGCAGGCGCCGATCGCGCGGATAACGGTTTTATGCTGATTTCAGCTGCATTGGTTTATTTTATGACACTTCCGGGGATCGCTTTATTTTATGGCGGACTGGTTCGCCGTGAAAATGTCCTTTCAGTTATGACCCAGGTTATCGTCAGCTTTTCACTGGTTTTGCTGCTGTGGGTTTTCTATGGCTACAGCATGGCATTTTCCGGAGGAAATGGTTTTACCGGTTATCTTTCATACGCCTTTCTCAGCGGGATAACAATTGAGAGTACCAGCGGCAGCATAAGCCTGCTGACGCATGTACTTTTTCAGGGTTCATTTGCGGCAATCACAGTCGCACTTATTACCGGCGCACTGGCTGAGCGCATCAGGTTCACTGCGTTTTTACTCTTTGTGGTGATATGGTTTTCACTGGCCTATGTTCCGATGGCTCATATGGTCTGGGGCGGAGGCTGGCTGGCAGAAAAAGGGGCACTGGATTTTGCCGGCGGGACGGTTGTTCATATTAATGCGGCAGTTGCGGGGTTAGTTGGTGCTTACTTATTAGGACCGCGGCTGGCACGGGGAAAATCGGCGGCAAAACCACACAGCCTGCCGATGGTCTTTACCGGCACCGCGATTTTGTATGTCGGCTGGTTCGGGTTTAATGCCGGATCGGCCGGTAAAGCGGACGGCACGGCTGCGCTGGCATTTATCAATACGGTTCTTGCTGTTGCCGGCGGCGTGCTTGCCTGGGTTGTGGCCGAATGGAGTATCCGGGGTAAGCCCTCACTTCTCGGCGCCTGCTCCGGTTGTATCGGCGGGTTGGTCGGGATCACGCCTGCCGCAGGAACGGTCGGGGTATGCGGGGCGATAGTTATCGGGCTGGTCAGCGGTGTTGCCGGGTATTGGGGAGTGACCGTCCTGAAGCGCCGGCTGAAAGTGGATGATGTCTGTGATGTGTTCGGTATCCATGGTGTCTGCGGGATTATTGGCTGCCTGCTGACGGGGGTTTTTACCGCAGAGGCTCTGGGCGGCACCGGTTATGCAGAGGGGGTGACGATGCTCAGACAGCTTTGGGTACAGACTGAAAGTATCGTTGTGACAGTTATCTGGAGCGGAGTGATTGCTTACATCGCATTTAAACTTGCCGCACTGACAGTCGGGCTTCGTTGTACTGCTGATGATGAAATCAGCGGGCTGGATATCAGCTCTCACGGAGAGCGGGCGTATAACCGGTCGTAAGTTATAAAAAACAGGCCCCCGCTCATGATGTGATGCGGGGGCTTTTTTGT