Homologs in group_1046

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05915 FBDBKF_05915 85.4 Morganella morganii S1 nlpE envelope stress response activation lipoprotein NlpE
EHELCC_08960 EHELCC_08960 85.4 Morganella morganii S2 nlpE envelope stress response activation lipoprotein NlpE
NLDBIP_09340 NLDBIP_09340 85.4 Morganella morganii S4 nlpE envelope stress response activation lipoprotein NlpE
LHKJJB_08415 LHKJJB_08415 85.4 Morganella morganii S3 nlpE envelope stress response activation lipoprotein NlpE
HKOGLL_07965 HKOGLL_07965 85.4 Morganella morganii S5 nlpE envelope stress response activation lipoprotein NlpE
PMI_RS11185 PMI_RS11185 50.0 Proteus mirabilis HI4320 nlpE envelope stress response activation lipoprotein NlpE

Distribution of the homologs in the orthogroup group_1046

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1046

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P40710 6.45e-48 160 39 2 201 1 nlpE Lipoprotein NlpE Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15980
Feature type CDS
Gene nlpE
Product envelope stress response activation lipoprotein NlpE
Location 206017 - 206676 (strand: 1)
Length 660 (nucleotides) / 219 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1046
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04170 NlpE N-terminal domain
PF17185 NlpE C-terminal OB domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3015 Cell wall/membrane/envelope biogenesis (M)
Defense mechanisms (V)		 MV Uncharacterized lipoprotein NlpE involved in copper resistance

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06079 copper homeostasis protein (lipoprotein) Cationic antimicrobial peptide (CAMP) resistance -

Protein Sequence

MKNLTKFLLAVGIFSITACSSTVSVTPTAEVHVLDRAYSGVVPCADCSGMGVTVLLETDGTYVMQRTYLETRDGNKTFFETGTWAKDGDKFRFTDTTGQRSYYDPQDKSLVMLDTEGNPIESDLNYTLRMVKPVPLKGEYRYLADAATFKDCETGVVYAVADNLGLERGYSKLGVEGGTPVYMEAEGYYSIRPSMEDGQFDQALIQTGKSVLDKSRGCK

Flanking regions ( +/- flanking 50bp)

TGACAATCAATTTGTTAACATTAACTCACTTGATGTTCAGGAGGATAAATATGAAAAATCTGACAAAATTCTTGCTGGCGGTGGGTATTTTCAGCATAACCGCCTGTAGTTCTACAGTATCAGTAACACCGACAGCAGAAGTACACGTACTTGATCGCGCCTATTCGGGTGTTGTTCCGTGCGCCGATTGCAGCGGAATGGGTGTGACTGTGCTGCTGGAAACTGATGGCACTTATGTGATGCAGCGGACCTATCTGGAAACCCGTGACGGGAACAAAACGTTTTTTGAAACCGGTACCTGGGCGAAAGACGGAGACAAATTCCGTTTCACCGATACCACGGGGCAGCGATCTTATTACGATCCACAGGATAAATCCCTGGTGATGCTGGATACCGAAGGAAATCCGATCGAATCTGATCTGAACTATACCCTGAGAATGGTAAAACCTGTGCCGTTGAAAGGGGAATACCGTTATCTTGCCGATGCCGCAACCTTTAAAGATTGTGAAACCGGCGTTGTTTATGCGGTGGCAGATAATCTTGGGTTAGAGCGCGGTTACAGTAAACTGGGCGTGGAAGGCGGTACACCGGTTTATATGGAAGCGGAAGGGTATTACAGTATCCGCCCATCCATGGAAGATGGTCAGTTTGATCAGGCGCTTATCCAGACCGGTAAATCTGTTTTAGATAAATCACGCGGCTGTAAATAAGTCATCCGTTGTGTGACCGGTACAAAAAAGGCTGAGCATCCGCTCAGCCT