Homologs in group_1193

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06455 FBDBKF_06455 93.3 Morganella morganii S1 ribF bifunctional riboflavin kinase/FAD synthetase
EHELCC_09500 EHELCC_09500 93.3 Morganella morganii S2 ribF bifunctional riboflavin kinase/FAD synthetase
NLDBIP_09880 NLDBIP_09880 93.3 Morganella morganii S4 ribF bifunctional riboflavin kinase/FAD synthetase
LHKJJB_07875 LHKJJB_07875 93.3 Morganella morganii S3 ribF bifunctional riboflavin kinase/FAD synthetase
HKOGLL_07425 HKOGLL_07425 93.0 Morganella morganii S5 ribF bifunctional riboflavin kinase/FAD synthetase
PMI_RS00070 PMI_RS00070 76.5 Proteus mirabilis HI4320 ribF bifunctional riboflavin kinase/FAD synthetase

Distribution of the homologs in the orthogroup group_1193

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1193

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AG43 8.81e-155 438 69 1 309 3 ribF Bifunctional riboflavin kinase/FMN adenylyltransferase Shigella flexneri
P0AG40 8.81e-155 438 69 1 309 1 ribF Bifunctional riboflavin kinase/FMN adenylyltransferase Escherichia coli (strain K12)
P0AG41 8.81e-155 438 69 1 309 3 ribF Bifunctional riboflavin kinase/FMN adenylyltransferase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AG42 8.81e-155 438 69 1 309 3 ribF Bifunctional riboflavin kinase/FMN adenylyltransferase Escherichia coli O157:H7
P44957 1.42e-111 328 54 0 307 3 ribF Bifunctional riboflavin kinase/FMN adenylyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57250 2.25e-99 298 43 1 313 3 ribF Bifunctional riboflavin kinase/FMN adenylyltransferase Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K9Z1 6.92e-95 286 44 3 309 3 ribF Bifunctional riboflavin kinase/FMN adenylyltransferase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P22990 1.65e-90 275 52 3 296 3 ribF Bifunctional riboflavin kinase/FMN adenylyltransferase Pseudomonas fluorescens
P73651 4.41e-60 196 44 6 275 3 ribF Bifunctional riboflavin kinase/FMN adenylyltransferase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P54575 2.06e-54 182 37 7 305 3 ribC Bifunctional riboflavin kinase/FMN adenylyltransferase Bacillus subtilis (strain 168)
Q8Y7F2 5.77e-52 176 36 7 293 1 ribCF Bifunctional riboflavin kinase/FMN adenylyltransferase Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q59263 7.14e-44 156 31 6 323 1 ribF Bifunctional riboflavin kinase/FMN adenylyltransferase Corynebacterium ammoniagenes
Q8Y914 5.12e-28 112 32 7 240 1 ribC FAD synthetase Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
A4IT50 3.6e-27 107 38 4 173 1 ribF Putative bifunctional riboflavin kinase/FMN adenylyltransferase Geobacillus thermodenitrificans (strain NG80-2)
Q7NBZ0 3.2e-25 109 30 12 312 3 ribF/mnmA Trifunctional protein RibF/MnmA Mycoplasmoides gallisepticum (strain R(low / passage 15 / clone 2))
P75587 4.08e-21 94 28 11 291 3 ribF Bifunctional riboflavin kinase/FMN adenylyltransferase Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P47391 3.8e-17 83 28 10 293 3 ribF Bifunctional riboflavin kinase/FMN adenylyltransferase Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
P94465 2.41e-15 77 41 3 110 2 ribR RNA-binding riboflavin kinase RibR Bacillus subtilis (strain 168)
O84990 3.13e-10 62 25 5 224 3 ribF Putative bifunctional riboflavin kinase/FMN adenylyltransferase Rhodococcus opacus
Q9FMW8 5.05e-10 63 28 7 200 1 RIBF1 FAD synthetase 1, chloroplastic Arabidopsis thaliana
Q10BX9 1.25e-07 56 26 7 193 3 RIBF FAD synthetase, chloroplastic Oryza sativa subsp. japonica
Q8VZR0 1.71e-07 55 27 9 222 1 RIBF2 FAD synthetase 2, chloroplastic Arabidopsis thaliana
Q84MD8 5.46e-07 54 33 5 129 1 FHY Bifunctional riboflavin kinase/FMN phosphatase Arabidopsis thaliana
O74866 3.68e-06 49 33 5 122 1 fmn1 Riboflavin kinase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
A2QFH1 0.000495 44 26 4 152 3 fmn1 Riboflavin kinase Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513)
A4QQ05 0.00065 43 27 6 164 3 FMN1 Riboflavin kinase Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15470
Feature type CDS
Gene ribF
Product bifunctional riboflavin kinase/FAD synthetase
Location 82261 - 83205 (strand: 1)
Length 945 (nucleotides) / 314 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000005
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1193
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01687 Riboflavin kinase
PF06574 FAD synthetase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0196 Coenzyme transport and metabolism (H) H FAD synthase

Kegg Ortholog Annotation(s)

Protein Sequence

MELIRGTHNIRARHHGCVLTIGNFDGVHRGHQALLSHLAQEGQRLGLPSVVMIFEPQPPEFFAPDKAPARLTRLRDKVKYLAHYGADYLLCVKFNKQFASLTPEAFISHLLVEQLGVKFLVVGDDFRFGKNRQGDFAGLCEAGKRFGFTVRSTESFCDNGTRISSTAIRRALECDDLAQAEALLGHPYRISGRVVHGNELGRTIGFPTANIPLKRLTAPVSGVYAVDVYGLGPKPLPGVANIGSRPTVQGKERQLEVHLIDVAMDLYGQHPDVVLRKKLRNEQRFASLDELKAQIAQDEIAAREFLQLHPSLCV

Flanking regions ( +/- flanking 50bp)

CGCGGCGGACAAGGTATAATCAGGCTAATTTTGACTGTATTGAGCCTGCTATGGAGCTAATTCGCGGTACTCATAATATTCGCGCGCGACATCACGGATGCGTGCTGACTATTGGTAATTTTGATGGTGTTCATCGCGGGCATCAGGCATTACTGTCACATCTGGCACAAGAAGGCCAACGTCTGGGGCTGCCGTCGGTCGTCATGATCTTCGAGCCGCAGCCGCCGGAATTTTTTGCGCCTGATAAAGCACCGGCACGCCTGACCCGCCTGCGCGATAAGGTAAAATATCTTGCACACTACGGTGCGGACTACTTATTGTGTGTTAAATTCAATAAACAGTTTGCCTCGCTGACGCCGGAAGCCTTTATCTCACACCTGCTGGTTGAGCAACTGGGTGTGAAATTTCTGGTGGTCGGGGACGATTTCCGCTTCGGAAAAAACCGGCAGGGTGATTTTGCCGGGTTATGTGAAGCGGGTAAACGCTTTGGTTTTACCGTGCGCAGCACAGAAAGTTTCTGTGATAACGGCACGCGGATCAGCAGTACGGCTATCCGCCGTGCGCTGGAATGTGATGATTTAGCGCAGGCCGAAGCGCTGCTCGGGCATCCGTACCGTATCAGCGGGCGGGTGGTTCACGGCAACGAACTCGGGCGCACAATCGGGTTTCCGACCGCCAATATTCCCCTGAAACGCCTGACCGCACCGGTCAGCGGTGTTTATGCGGTGGATGTTTACGGTCTCGGACCGAAACCCCTTCCGGGTGTGGCTAATATCGGCTCCCGTCCGACAGTGCAGGGTAAAGAGCGACAACTGGAAGTACATCTGATTGATGTTGCCATGGATTTATACGGGCAGCATCCGGATGTTGTATTACGCAAAAAATTACGAAATGAACAGCGGTTTGCCTCGCTTGATGAGCTGAAAGCGCAAATCGCACAGGATGAAATTGCGGCAAGGGAATTCTTACAATTGCATCCCTCGTTATGTGTTTAACGGAATAATAGTGGAACTGAGAAACTGATGAGTGACTATAAAAATACCCT