COG0196


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0196, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description FAD synthase
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG0196 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1131 FBDBKF_06455 130374 131318 -1 ribF bifunctional riboflavin kinase/FAD synthetase Morganella morganii S1
1 group_1131 EHELCC_09500 130946 131890 -1 ribF bifunctional riboflavin kinase/FAD synthetase Morganella morganii S2
2 group_1131 NLDBIP_09880 130946 131890 -1 ribF bifunctional riboflavin kinase/FAD synthetase Morganella morganii S4
3 group_1131 LHKJJB_07875 85348 86292 1 ribF bifunctional riboflavin kinase/FAD synthetase Morganella morganii S3
4 group_1131 HKOGLL_07425 85348 86292 1 ribF bifunctional riboflavin kinase/FAD synthetase Morganella morganii S5
5 group_1131 F4V73_RS15470 82261 83205 1 ribF bifunctional riboflavin kinase/FAD synthetase Morganella psychrotolerans
6 group_1131 PMI_RS00070 24861 25802 1 ribF bifunctional riboflavin kinase/FAD synthetase Proteus mirabilis HI4320