Homologs in group_3008

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17665 FBDBKF_17665 87.2 Morganella morganii S1 ataC c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily
EHELCC_18150 EHELCC_18150 87.2 Morganella morganii S2 ataC c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily
NLDBIP_18000 NLDBIP_18000 87.2 Morganella morganii S4 ataC c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily
LHKJJB_18195 LHKJJB_18195 87.2 Morganella morganii S3 ataC c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily
HKOGLL_18005 HKOGLL_18005 87.2 Morganella morganii S5 ataC c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily

Distribution of the homologs in the orthogroup group_3008

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3008

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q5H8A4 2.49e-06 52 23 10 270 1 PIGG GPI ethanolamine phosphate transferase 2 Homo sapiens
O13663 0.001 44 32 1 65 3 gpi13 GPI ethanolamine phosphate transferase 3 Schizosaccharomyces pombe (strain 972 / ATCC 24843)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15045
Feature type CDS
Gene -
Product alkaline phosphatase family protein
Location 247965 - 248789 (strand: -1)
Length 825 (nucleotides) / 274 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3008
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1524 Signal transduction mechanisms (T) T c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily

Protein Sequence

MNHTVILVVLDGLNYRTAHDCMGFMQGLTESQDATLYRLDCELPSLSRPLYECILTGIRPVDSGVVHNQVVRLSYNDSIFSLAQKAGKTTAAAAYHWVSELYNRAPFDAVRDRFTHDDSLAIQHGCFYQSDSYPDDHLFIDAEYLRREYHPDFLLIHPMNIDDTGHKFGADSPQYRNSARRADGRLSAYLPAWREAGYQVLVTSDHGMNNDRSHGGILDEERHVPLFVVGDAFSHDDSLPVKQTQLCGAICRLLGLTGHDKPSVPHLLREDHHG

Flanking regions ( +/- flanking 50bp)

GAAACTGTGGCAGCAAAACGTTATCATCAACATGAACTAACGGAATGACCATGAATCACACTGTTATCCTGGTCGTTCTGGATGGCTTAAACTACCGCACAGCCCATGATTGCATGGGCTTTATGCAGGGTTTGACTGAATCTCAGGACGCCACACTTTACCGCCTTGATTGTGAGTTACCCTCACTTTCCCGTCCGCTGTACGAATGTATTCTGACCGGCATCCGCCCGGTCGACAGCGGGGTTGTTCATAACCAGGTTGTACGTTTGTCATATAACGACAGTATTTTTTCCCTGGCACAGAAAGCCGGAAAGACCACTGCCGCTGCGGCATATCACTGGGTCAGTGAGTTATATAACCGCGCACCGTTTGATGCCGTCCGTGACCGTTTCACTCATGATGATTCGCTGGCTATTCAACACGGCTGTTTTTATCAGTCAGACAGCTATCCGGATGATCATCTGTTTATTGATGCGGAATATTTGCGCCGTGAATACCATCCCGACTTTCTTCTTATTCATCCTATGAATATTGATGATACCGGACATAAGTTTGGCGCTGATTCCCCGCAGTACCGCAACAGCGCCCGCCGGGCTGATGGTCGGCTCTCCGCTTATCTGCCGGCATGGCGGGAAGCCGGTTATCAGGTGCTGGTGACCAGCGACCACGGCATGAATAATGACAGATCACACGGCGGCATTCTGGATGAAGAGCGCCATGTGCCGCTGTTTGTTGTCGGGGATGCCTTTTCTCATGATGATTCTCTCCCGGTGAAACAGACACAATTGTGCGGGGCAATCTGCCGGTTACTCGGTCTGACCGGACACGACAAACCCTCTGTGCCTCACCTGCTGCGGGAAGATCACCATGGCTGATATTCTGCCGGAGCTGACCGTCATGAAAAAGCAGCAGCAAATCCGCGTAA