COG1524


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1524, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily
Function(s) descr. Signal transduction mechanisms (T)

Occurence in the database

COG1524 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3008 FBDBKF_17665 29311 30135 -1 ataC c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily Morganella morganii S1
1 group_3008 EHELCC_18150 28687 29511 -1 ataC c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily Morganella morganii S2
2 group_3008 NLDBIP_18000 9226 10050 1 ataC c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily Morganella morganii S4
3 group_3008 LHKJJB_18195 9226 10050 1 ataC c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily Morganella morganii S3
4 group_3008 HKOGLL_18005 28687 29511 -1 ataC c-di-AMP phosphodiesterase AtaC or nucleotide pyrophosphatase, AlkP superfamily Morganella morganii S5
5 group_3008 F4V73_RS15045 247965 248789 -1 alkaline phosphatase family protein Morganella psychrotolerans