Homologs in group_2890

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11905 FBDBKF_11905 96.0 Morganella morganii S1 hdeB Acid stress chaperone HdeB
EHELCC_14400 EHELCC_14400 96.0 Morganella morganii S2 hdeB Acid stress chaperone HdeB
NLDBIP_15495 NLDBIP_15495 96.0 Morganella morganii S4 hdeB Acid stress chaperone HdeB
LHKJJB_15115 LHKJJB_15115 96.0 Morganella morganii S3 hdeB Acid stress chaperone HdeB
HKOGLL_14235 HKOGLL_14235 96.0 Morganella morganii S5 hdeB Acid stress chaperone HdeB

Distribution of the homologs in the orthogroup group_2890

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2890

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AET4 1.52e-18 77 37 1 94 3 hdeB Acid stress chaperone HdeB Shigella flexneri
P0AET2 1.52e-18 77 37 1 94 1 hdeB Acid stress chaperone HdeB Escherichia coli (strain K12)
P0AET3 1.52e-18 77 37 1 94 3 hdeB Acid stress chaperone HdeB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14750
Feature type CDS
Gene -
Product HdeA/HdeB family chaperone
Location 184994 - 185296 (strand: -1)
Length 303 (nucleotides) / 100 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2890
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF06411 HdeA/HdeB family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19778 acid stress chaperone HdeB - -

Protein Sequence

MKKYFVTACLVAASAFSSVALAEPADIQVPDKMTCKQYVDLNPQSWAPVALWVISKDTQYPGGDFVALSEKGVAEAPKIVEFCKKYPEGTLQDYLAARNK

Flanking regions ( +/- flanking 50bp)

AAAACGTATTCATTCTGTTTCCTGAAAATAAAAAATGAGGTTTATTTATTATGAAAAAGTATTTTGTTACCGCATGTCTGGTTGCAGCAAGTGCGTTTTCGTCTGTGGCACTCGCAGAGCCCGCTGATATTCAGGTGCCTGATAAAATGACCTGCAAACAGTATGTCGATTTGAACCCGCAAAGCTGGGCGCCGGTTGCCCTGTGGGTTATCAGCAAAGATACGCAATATCCGGGCGGTGACTTTGTCGCACTGTCTGAAAAAGGGGTGGCAGAAGCACCGAAAATCGTTGAATTCTGTAAAAAATATCCTGAAGGTACCTTACAGGATTACTTAGCTGCCCGTAATAAATAACCCCTGCCACTAAATTATAAGATGCCGGAAAATACTTTCCGGCGTTTTTT