Homologs in group_2890

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11905 FBDBKF_11905 100.0 Morganella morganii S1 hdeB Acid stress chaperone HdeB
EHELCC_14400 EHELCC_14400 100.0 Morganella morganii S2 hdeB Acid stress chaperone HdeB
LHKJJB_15115 LHKJJB_15115 100.0 Morganella morganii S3 hdeB Acid stress chaperone HdeB
HKOGLL_14235 HKOGLL_14235 100.0 Morganella morganii S5 hdeB Acid stress chaperone HdeB
F4V73_RS14750 F4V73_RS14750 96.0 Morganella psychrotolerans - HdeA/HdeB family chaperone

Distribution of the homologs in the orthogroup group_2890

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2890

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AET4 1.57e-18 76 38 1 94 3 hdeB Acid stress chaperone HdeB Shigella flexneri
P0AET2 1.57e-18 76 38 1 94 1 hdeB Acid stress chaperone HdeB Escherichia coli (strain K12)
P0AET3 1.57e-18 76 38 1 94 3 hdeB Acid stress chaperone HdeB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_15495
Feature type CDS
Gene hdeB
Product Acid stress chaperone HdeB
Location 106312 - 106614 (strand: -1)
Length 303 (nucleotides) / 100 (amino acids)

Contig

Accession ZDB_531
Length 138641 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2890
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF06411 HdeA/HdeB family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19778 acid stress chaperone HdeB - -

Protein Sequence

MKKYFVTACLVAASAFSSVALAEPADIQVPDKMTCKEFVNLNPQSWAPVALWVISKDTQYPGGDFVALSEKGVAEAPKIVEFCKKFPEGTLQDYLAARNK

Flanking regions ( +/- flanking 50bp)

GAAAACGTATTTGTTGTATTTCCTGAAACAAAAAACGAGGTTTATTTATCATGAAAAAGTATTTCGTCACCGCGTGTCTGGTTGCTGCAAGTGCATTTTCCTCAGTGGCTCTCGCTGAACCTGCTGATATTCAGGTACCCGATAAAATGACCTGCAAAGAATTCGTTAATCTGAACCCGCAAAGCTGGGCGCCGGTTGCCCTGTGGGTGATCAGCAAAGACACACAATACCCGGGCGGTGACTTTGTGGCACTGTCAGAAAAAGGGGTTGCAGAAGCACCAAAAATTGTTGAATTCTGTAAGAAATTCCCGGAAGGCACCCTTCAGGATTACCTGGCTGCCCGCAATAAATAATCCCTGAAAATAAATAATAAAACGCCGGAAATATATTCCGGCGTTTTTAT