Homologs in group_2892

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11955 FBDBKF_11955 82.2 Morganella morganii S1 ampC CubicO group peptidase, beta-lactamase class C family
EHELCC_14350 EHELCC_14350 82.2 Morganella morganii S2 ampC CubicO group peptidase, beta-lactamase class C family
NLDBIP_15445 NLDBIP_15445 82.2 Morganella morganii S4 ampC CubicO group peptidase, beta-lactamase class C family
LHKJJB_15165 LHKJJB_15165 82.2 Morganella morganii S3 ampC CubicO group peptidase, beta-lactamase class C family
HKOGLL_14285 HKOGLL_14285 82.2 Morganella morganii S5 ampC CubicO group peptidase, beta-lactamase class C family

Distribution of the homologs in the orthogroup group_2892

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2892

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P15555 2.79e-12 70 24 14 328 1 None D-alanyl-D-alanine carboxypeptidase Streptomyces sp. (strain R61)
O31773 5.64e-11 66 25 14 281 2 pbpX Putative penicillin-binding protein PbpX Bacillus subtilis (strain 168)
P83111 2.2e-09 62 26 11 280 1 LACTB Serine beta-lactamase-like protein LACTB, mitochondrial Homo sapiens
A0A2I1D2N1 6.05e-09 60 27 9 235 3 ungD' Unguisins hydrolase ungD' Aspergillus campestris (strain IBT 28561)
Q9EP89 3.32e-08 58 25 12 293 1 Lactb Serine beta-lactamase-like protein LACTB, mitochondrial Mus musculus
P32959 3.37e-08 58 25 4 185 1 pbpE Penicillin-binding protein 4* Bacillus subtilis (strain 168)
P77619 9.51e-08 57 30 7 162 1 yfeW Putative D-alanyl-D-alanine carboxypeptidase Escherichia coli (strain K12)
Q9KX40 2.96e-07 55 30 7 178 1 estB Esterase EstB Burkholderia gladioli
Q8XBJ0 6.69e-07 54 30 7 162 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Escherichia coli O157:H7
Q8ZN80 2.62e-06 52 29 7 168 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B5F0K5 2.76e-06 52 29 7 168 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella agona (strain SL483)
B4TD53 2.96e-06 52 29 7 168 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella heidelberg (strain SL476)
B5R4I5 3.67e-06 52 29 7 168 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella enteritidis PT4 (strain P125109)
C0PZ64 3.98e-06 52 29 7 168 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella paratyphi C (strain RKS4594)
A9N307 3.98e-06 52 29 7 168 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B4T0K5 3.98e-06 52 29 7 168 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella newport (strain SL254)
B5FQG8 3.98e-06 52 29 7 168 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella dublin (strain CT_02021853)
Q57LN2 3.98e-06 52 29 7 168 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella choleraesuis (strain SC-B67)
Q8Z4S7 4.05e-06 52 29 7 168 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella typhi
P24735 4.16e-06 51 26 7 270 1 ampC Beta-lactamase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
B4TR50 6.38e-06 51 29 7 168 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella schwarzengrund (strain CVM19633)
B5BB26 1.46e-05 50 29 7 168 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella paratyphi A (strain AKU_12601)
Q5PCQ2 1.46e-05 50 29 7 168 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q5HH27 2.6e-05 49 23 13 273 2 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus (strain COL)
Q2FZK3 2.6e-05 49 23 13 273 2 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q7A185 2.69e-05 49 23 13 273 3 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus (strain MW2)
O50608 2.69e-05 49 23 13 273 1 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus
Q6GAF6 2.69e-05 49 23 13 273 3 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus (strain MSSA476)
Q7A6A2 2.69e-05 49 23 13 273 1 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus (strain N315)
Q7A2T0 2.69e-05 49 23 13 273 1 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q6GI27 2.91e-05 49 23 16 291 3 fmtA Teichoic acid D-alanine hydrolase Staphylococcus aureus (strain MRSA252)
B5RCU8 3.88e-05 48 29 7 168 3 yfeW Putative D-alanyl-D-alanine carboxypeptidase Salmonella gallinarum (strain 287/91 / NCTC 13346)
Q06317 0.000122 47 26 8 197 3 pbp Penicillin-binding protein 4 Amycolatopsis lactamdurans
P0AD70 0.000131 47 28 5 159 1 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH Escherichia coli (strain K12)
P0AD71 0.000131 47 28 5 159 3 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH Escherichia coli O157:H7
P83095 0.00018 47 30 4 97 1 LACTB Serine beta-lactamase-like protein LACTB, mitochondrial Bos taurus
P18539 0.000189 46 25 7 206 3 ampC Beta-lactamase Serratia marcescens
Q9KJ74 0.000234 46 33 6 135 4 flp Protein flp Staphylococcus aureus
Q2FVH6 0.000234 46 33 6 135 4 flp Protein flp Staphylococcus aureus (strain NCTC 8325 / PS 47)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14700
Feature type CDS
Gene -
Product serine hydrolase domain-containing protein
Location 176816 - 177844 (strand: -1)
Length 1029 (nucleotides) / 342 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2892
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00144 Beta-lactamase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1680 Defense mechanisms (V) V CubicO group peptidase, beta-lactamase class C family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] - -

Protein Sequence

MPTQNLSALLQNVQPAGFATAIYFTGEGCEIPDGLAHGGLSKTDSTPVTPDTPIRIASNTKTFTAAAILRLYELNKLALNAPVGPLITPQYAQWLTDAGYDLTAITVRHLLSHSAGLYDHADEHYVKEVLADPGHIWTRDEQIRLYVSRGYPLMAPGTCFLYSDTGYLLLADIIERITQLPLAQAVRELLRFDALGMTSAYWEVYEPVPAGLPPRAHQYLGNIDGDTISPTMDLYGGGGLVMSVKDLAMFMAHLFEGRIFDSPGTLEEMLKQGSHDGAEDYRAGMMVTKREGQTLWYHLGFWGTAAYYHPQKKIAAAGFVNSRDTRPWLMNLLETRLCQNDD

Flanking regions ( +/- flanking 50bp)

TGTCATCTCACATATCTTTTTGATTTGTTAATGATTGAGGTGACCTGACTATGCCAACTCAAAATCTGTCTGCCCTGTTGCAGAATGTTCAGCCCGCCGGTTTTGCAACGGCAATATATTTTACCGGCGAAGGCTGCGAAATCCCTGACGGGCTGGCACACGGCGGTCTGAGTAAGACTGACAGCACACCCGTCACACCGGATACCCCGATCCGGATAGCCAGTAACACCAAAACATTTACAGCCGCCGCCATCCTGCGGCTGTATGAACTGAATAAACTCGCTCTGAATGCCCCGGTCGGGCCGCTCATCACCCCGCAATATGCACAATGGCTGACAGACGCAGGCTACGACCTGACGGCAATCACTGTCCGCCATCTTCTCAGCCATAGTGCCGGACTGTATGACCATGCAGACGAGCACTATGTTAAAGAGGTGCTTGCCGATCCCGGTCATATCTGGACGCGGGATGAGCAGATCCGCCTTTATGTCAGCCGCGGATATCCGCTGATGGCTCCCGGCACCTGTTTTCTCTACTCTGATACCGGCTATTTATTACTGGCGGATATTATTGAGCGCATCACACAGTTGCCGCTGGCGCAGGCTGTCCGCGAGTTGCTCCGCTTTGATGCATTGGGAATGACATCCGCATATTGGGAAGTGTATGAGCCGGTTCCGGCGGGGCTGCCGCCACGGGCGCATCAGTATCTCGGTAATATCGACGGCGATACCATCAGCCCGACAATGGATCTCTACGGCGGTGGCGGATTGGTCATGTCAGTAAAAGATTTAGCCATGTTTATGGCGCATCTGTTTGAAGGTCGTATTTTTGACAGTCCCGGCACGCTTGAAGAAATGCTGAAACAAGGTTCGCACGATGGTGCAGAAGATTACCGGGCAGGGATGATGGTCACTAAAAGAGAAGGTCAGACACTCTGGTATCACCTGGGATTCTGGGGTACTGCTGCCTACTACCATCCGCAGAAAAAGATTGCCGCCGCCGGGTTTGTTAACAGCCGGGATACCCGCCCGTGGCTGATGAATCTGCTGGAAACCCGTCTGTGTCAGAATGATGACTAAGCGCTCTGATTTCCCGGAAAAATAATAATAAAAAGGGGCATCCGGAGATA