Homologs in group_1737

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12120 FBDBKF_12120 83.7 Morganella morganii S1 sWEET Sugar transporter, SemiSWEET family, contains PQ motif
EHELCC_14185 EHELCC_14185 83.7 Morganella morganii S2 sWEET Sugar transporter, SemiSWEET family, contains PQ motif
NLDBIP_15280 NLDBIP_15280 83.7 Morganella morganii S4 sWEET Sugar transporter, SemiSWEET family, contains PQ motif
LHKJJB_15330 LHKJJB_15330 83.7 Morganella morganii S3 sWEET Sugar transporter, SemiSWEET family, contains PQ motif
HKOGLL_14450 HKOGLL_14450 83.7 Morganella morganii S5 sWEET Sugar transporter, SemiSWEET family, contains PQ motif
PMI_RS13965 PMI_RS13965 61.5 Proteus mirabilis HI4320 - SemiSWEET family transporter

Distribution of the homologs in the orthogroup group_1737

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1737

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q54JW5 0.000234 41 24 0 82 2 slc50a1 Sugar transporter SWEET1 Dictyostelium discoideum
D3ZH22 0.001 39 29 2 82 1 Slc50a1 Sugar transporter SWEET1 Rattus norvegicus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14520
Feature type CDS
Gene -
Product SemiSWEET family transporter
Location 133850 - 134128 (strand: 1)
Length 279 (nucleotides) / 92 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1737
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03083 Sugar efflux transporter for intercellular exchange

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4095 Carbohydrate transport and metabolism (G) G Sugar transporter, SemiSWEET family, contains PQ motif

Protein Sequence

MSGSESKPDGHSRFIRYLGWIATFTAFCMYVSYIPQIIDNLDGHKTSPLQPLAAAFNCTLWVIYGIKVKDLPVAIANAPGVLFGLVAALTAL

Flanking regions ( +/- flanking 50bp)

TAGGTTAACAATATAGCATCATACTGATAATGCCTTTTCCGGAGGAATGAATGAGTGGCTCTGAAAGTAAACCTGACGGGCACAGTCGCTTTATCCGCTATCTGGGCTGGATTGCCACGTTTACTGCATTTTGTATGTATGTCTCTTATATTCCTCAGATTATCGATAACCTTGACGGACACAAAACCTCGCCGTTACAGCCTCTGGCAGCTGCATTTAACTGCACCTTGTGGGTTATCTACGGTATAAAAGTGAAAGACCTGCCGGTGGCAATCGCTAATGCGCCGGGTGTGCTTTTTGGTTTGGTGGCAGCCCTCACTGCACTGTAATGGTGCAATGATAATCAGGTGGCTTGTTGTGCTGTGATATGAATCAGCGG