Homologs in group_58

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12 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00470 FBDBKF_00470 74.1 Morganella morganii S1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
FBDBKF_10820 FBDBKF_10820 93.9 Morganella morganii S1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
EHELCC_01075 EHELCC_01075 74.1 Morganella morganii S2 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
EHELCC_19410 EHELCC_19410 93.9 Morganella morganii S2 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
NLDBIP_02385 NLDBIP_02385 74.1 Morganella morganii S4 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
NLDBIP_14985 NLDBIP_14985 93.9 Morganella morganii S4 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
LHKJJB_03900 LHKJJB_03900 74.1 Morganella morganii S3 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
LHKJJB_14360 LHKJJB_14360 93.9 Morganella morganii S3 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
HKOGLL_03145 HKOGLL_03145 74.1 Morganella morganii S5 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
HKOGLL_12980 HKOGLL_12980 93.9 Morganella morganii S5 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
F4V73_RS06430 F4V73_RS06430 74.8 Morganella psychrotolerans - NCS2 family permease
PMI_RS14410 PMI_RS14410 82.1 Proteus mirabilis HI4320 - NCS2 family permease

Distribution of the homologs in the orthogroup group_58

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_58

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P31466 0.0 686 79 1 443 1 adeP Adenine permease AdeP Escherichia coli (strain K12)
P31440 0.0 650 74 0 429 1 adeQ Adenine permease AdeQ Escherichia coli (strain K12)
Q57772 1.99e-135 399 45 1 433 3 MJ0326 Putative permease MJ0326 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O34978 1.25e-105 323 41 4 429 1 pbuO Guanine/hypoxanthine permease PbuO Bacillus subtilis (strain 168)
A0A2A5K5H4 3.01e-99 306 38 3 410 1 PL1_1235 Nucleobase transporter PlAzg1 Paenibacillus larvae subsp. larvae (strain NRRL B-3650 / LMG 16245)
O34987 9.7e-97 300 40 4 441 1 pbuG Guanine/hypoxanthine permease PbuG Bacillus subtilis (strain 168)
P0AF52 2.04e-92 289 38 5 443 1 ghxP Guanine/hypoxanthine permease GhxP Escherichia coli (strain K12)
P0AF53 2.04e-92 289 38 5 443 3 ghxP Guanine/hypoxanthine permease GhxP Escherichia coli O157:H7
P44530 9.05e-87 275 38 4 426 3 HI_0125 Putative permease HI_0125 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q46817 9.09e-82 262 37 3 435 1 ghxQ Guanine/hypoxanthine permease GhxQ Escherichia coli (strain K12)
Q9SRK7 5.95e-63 216 31 12 559 1 AZG1 Adenine/guanine permease AZG1 Arabidopsis thaliana
A0A2A5K485 8.16e-59 203 31 4 418 1 PL1_1481 Nucleobase transporter PlAzg2 Paenibacillus larvae subsp. larvae (strain NRRL B-3650 / LMG 16245)
O94300 7.17e-55 196 33 11 472 3 SPBC887.17 Putative xanthine/uracil permease C887.17 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
L7WRR4 5.51e-53 189 30 10 474 1 notK' Efflux pump notK' Aspergillus versicolor
Q84MA8 1.14e-51 185 31 10 485 2 AZG2 Adenine/guanine permease AZG2 Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14505
Feature type CDS
Gene -
Product NCS2 family permease
Location 129812 - 131149 (strand: 1)
Length 1338 (nucleotides) / 445 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_58
Orthogroup size 13
N. genomes 7

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Genomic region

Domains

PF00860 Permease family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2252 Nucleotide transport and metabolism (F) F Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06901 adenine/guanine/hypoxanthine permease - -

Protein Sequence

MTTPTSGTDPHQSLLQRVFKLQEHGTTVRTEIIAGLTTFLTMVYIIFVNPQILSFAGMDIKAVFVTTCLIAAIGSIGMGLFANLPVAVAPAMGLNAFFAFVVVGAMHYSWEVAMGAIFWGAVGLFILTLLRIRYWLIAHIPLSLRVGITSGIGLFIAMMGLKNAGIIVANPDTLVAVGNFTSHSVLLGSLGFFIIAILAARNIHAAVLVSIVVTTVAGLLLGDVTYQGVFDMPPSMMTVVGHVDIMGALDLSLAGIIFSFMLVNLFDSSGTLIGVTDKAGLSDERGRFPNMKKALYVDSISSVAGSAMGTSSVTAFIESTSGVSVGGRTGLTAIVVGLLFLAAIFVSPLAAMVPGYATAGALIYVGVLMTSSLVRVNWNDLTESVPAFVTAVMMPFSFSITEGIALGFIAYCAMKLGSGRWRELNLCVIIVSLMFILKMVFVDAA

Flanking regions ( +/- flanking 50bp)

CGATGAGGTAGAATAAGCCGAAAAAAATAAATTTCCGGGACTCCTTACTCATGACTACTCCGACCTCCGGCACTGATCCTCATCAGAGCCTGCTCCAGCGCGTGTTTAAATTACAGGAACACGGCACAACTGTCCGCACTGAAATCATTGCCGGGCTGACCACATTCCTCACCATGGTGTATATCATCTTCGTTAACCCGCAAATTCTCTCTTTTGCCGGGATGGATATCAAAGCCGTATTTGTCACCACCTGTCTGATCGCTGCTATCGGCAGTATCGGCATGGGATTATTTGCTAATCTGCCGGTTGCTGTCGCACCTGCGATGGGGCTGAATGCCTTTTTCGCCTTTGTGGTGGTCGGCGCGATGCATTATTCATGGGAAGTGGCGATGGGTGCCATTTTCTGGGGCGCGGTCGGGTTATTTATCCTGACGTTACTGCGTATCCGTTACTGGCTGATTGCCCATATCCCGCTGAGTCTGCGCGTGGGGATCACCAGCGGTATCGGGCTGTTTATTGCCATGATGGGGCTGAAAAACGCCGGTATTATTGTGGCGAATCCGGACACACTGGTCGCCGTCGGTAATTTCACCTCGCACAGTGTTCTGCTGGGGTCGCTGGGCTTCTTTATTATCGCCATTCTGGCGGCACGTAATATCCATGCCGCAGTATTAGTGTCGATTGTGGTGACAACCGTTGCCGGGCTTCTCCTCGGTGATGTCACGTACCAGGGTGTGTTTGATATGCCGCCGAGCATGATGACGGTTGTCGGCCATGTCGATATTATGGGTGCGCTGGATTTATCCCTCGCCGGTATTATTTTTTCCTTCATGCTGGTAAACCTGTTTGACTCCTCCGGCACACTGATTGGTGTGACAGACAAAGCCGGGCTGTCTGATGAAAGAGGGCGCTTCCCGAATATGAAAAAAGCGCTCTATGTTGACAGTATCAGCTCAGTGGCAGGCTCTGCGATGGGGACATCATCCGTCACTGCATTTATCGAAAGTACCTCTGGGGTTTCTGTCGGCGGGCGTACCGGGCTTACTGCGATTGTGGTTGGCTTGTTGTTCCTGGCGGCTATCTTTGTTTCGCCGCTGGCCGCCATGGTGCCGGGTTATGCAACTGCCGGGGCGCTTATTTATGTCGGCGTGTTAATGACATCGAGCCTGGTGCGCGTGAACTGGAACGACCTGACAGAATCTGTGCCGGCATTTGTGACCGCTGTGATGATGCCGTTCAGTTTTTCTATCACAGAAGGGATTGCATTAGGTTTTATCGCCTACTGCGCGATGAAACTGGGCTCCGGGCGCTGGCGTGAACTGAACCTGTGCGTGATTATTGTTTCGCTGATGTTTATTCTGAAGATGGTGTTTGTTGACGCTGCCTGATACCGGCAACAATGTGACTTAAATACAGCGATATAAAAAAGCCGCGTGAT