Homologs in group_2837

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10515 FBDBKF_10515 73.1 Morganella morganii S1 fimC P pilus assembly protein, chaperone PapD
EHELCC_14850 EHELCC_14850 73.1 Morganella morganii S2 fimC P pilus assembly protein, chaperone PapD
NLDBIP_14680 NLDBIP_14680 73.1 Morganella morganii S4 fimC P pilus assembly protein, chaperone PapD
LHKJJB_14665 LHKJJB_14665 73.1 Morganella morganii S3 fimC P pilus assembly protein, chaperone PapD
HKOGLL_13285 HKOGLL_13285 73.1 Morganella morganii S5 fimC P pilus assembly protein, chaperone PapD

Distribution of the homologs in the orthogroup group_2837

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2837

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P31697 2.39e-38 136 35 5 223 1 fimC Chaperone protein FimC Escherichia coli (strain K12)
P62609 3.97e-37 132 34 5 219 1 focC Chaperone protein FocC Escherichia coli
P62610 3.97e-37 132 34 5 219 3 focC Chaperone protein FocC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8X5K6 1.3e-36 131 33 4 224 2 lpfB Probable fimbrial chaperone LpfB Escherichia coli O157:H7
P59590 1.9e-36 131 34 6 234 3 fimC Chaperone protein FimC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P43661 8.04e-32 119 31 6 222 3 lpfB Chaperone protein LpfB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P53520 3.56e-30 115 33 7 229 3 pmfD Chaperone protein PmfD Proteus mirabilis (strain HI4320)
P21646 5.67e-30 114 30 8 234 3 mrkB Chaperone protein MrkB Klebsiella pneumoniae
P25402 1.26e-29 113 33 7 221 3 fanE Chaperone protein FanE Escherichia coli
P37923 1.24e-28 110 33 8 217 3 fimC Chaperone protein FimC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P15319 1.7e-28 110 31 8 227 1 papD Chaperone protein PapD Escherichia coli
P33128 7.58e-28 108 32 10 238 1 yadV Probable fimbrial chaperone YadV Escherichia coli (strain K12)
P77249 3.27e-27 107 31 8 225 2 sfmC Probable fimbrial chaperone SfmC Escherichia coli (strain K12)
P77599 1.74e-25 102 33 7 199 2 yfcS Probable fimbrial chaperone YfcS Escherichia coli (strain K12)
P33342 1.91e-25 102 29 7 226 2 yehC Probable fimbrial chaperone YehC Escherichia coli (strain K12)
P42914 3.36e-25 101 28 4 219 2 yraI Probable fimbrial chaperone YraI Escherichia coli (strain K12)
P75856 3.7e-25 101 33 7 224 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli (strain K12)
Q8X5E4 2.71e-24 99 33 8 225 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli O157:H7
P33409 9.28e-24 98 29 9 234 3 fimB Chaperone protein FimB/FhaD Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P77616 2.77e-22 94 28 8 216 3 yqiH Uncharacterized fimbrial chaperone YqiH Escherichia coli (strain K12)
P53516 1.54e-21 92 30 7 202 3 afaB Chaperone protein AfaB Escherichia coli
P26926 6.34e-21 91 29 9 223 1 caf1M Chaperone protein caf1M Yersinia pestis
P33407 1.71e-20 90 32 6 185 3 myfB Chaperone protein MyfB Yersinia enterocolitica
P33387 3.02e-20 89 33 9 233 3 sefB Chaperone protein SefB Salmonella enteritidis
P75749 6.84e-20 87 27 4 222 3 ybgP Uncharacterized fimbrial chaperone YbgP Escherichia coli (strain K12)
P15483 2.33e-19 86 31 6 206 3 None Chaperone protein CS3-1 Escherichia coli
P53519 3.43e-19 85 28 6 222 3 cssC Chaperone protein CssC Escherichia coli
P46004 1.83e-18 84 29 7 207 3 aggD Chaperone protein AggD Escherichia coli
P69966 2.78e-18 84 29 5 185 3 psaB Chaperone protein PsaB Yersinia pseudotuberculosis serotype I (strain IP32953)
P69965 2.78e-18 84 29 5 185 3 psaB Chaperone protein PsaB Yersinia pestis
P53518 5.11e-18 82 26 6 222 3 cssC Chaperone protein CssC Escherichia coli
P25401 6.17e-18 83 26 10 230 1 faeE Chaperone protein FaeE Escherichia coli
P46738 1.29e-17 82 29 7 202 3 nfaE Chaperone protein NfaE Escherichia coli
Q05433 6.3e-17 80 26 10 230 3 clpE Chaperone protein ClpE Escherichia coli
P40876 1.05e-15 76 28 8 223 2 ycbF Uncharacterized fimbrial chaperone YcbF Escherichia coli (strain K12)
P45991 6.75e-15 74 25 10 235 3 hifB Chaperone protein HifB Haemophilus influenzae
P35757 7.86e-15 74 25 10 242 3 hifB Chaperone protein HifB Haemophilus influenzae
P42183 6.17e-08 52 32 4 102 3 prsD Chaperone protein PrsD (Fragment) Escherichia coli
P46001 3.16e-05 45 28 4 107 4 fasE Protein FasE Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14225
Feature type CDS
Gene -
Product molecular chaperone
Location 63203 - 63886 (strand: -1)
Length 684 (nucleotides) / 227 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2837
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain
PF02753 Pili assembly chaperone PapD, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3121 Extracellular structures (W) W P pilus assembly protein, chaperone PapD

Protein Sequence

MFTKKITISVLTCLLFTVKSYAGFGLETTRLVYHEKNNSEGVVAFNTDKNRNYLLQSWVEDKAGKVSPDFVSTPPLLKLRAEQKNTLQVTKVVNLPSDRESLYWLNVKFVAPSSEGKENVLRYSMTNRIKIIYRPESLDNKDIETYVDKLTWSVSGNTLTVKNPTPYYVNVSKLVINNQEIKLSDGYLTPKSEETLKLSGTTNAPAHIRLTYINDYGKAIEKNVSVK

Flanking regions ( +/- flanking 50bp)

TTATTTAATCTGCGCCTTCATTTTATATGATTATTTAATCAGGCGACATTATGTTTACTAAAAAAATCACTATCTCTGTTTTAACATGCCTTTTATTCACGGTAAAAAGCTATGCAGGATTCGGTCTGGAAACTACCCGTCTGGTTTATCATGAAAAAAATAACAGTGAAGGTGTCGTTGCCTTTAATACTGACAAAAACAGAAACTATCTGCTGCAATCCTGGGTTGAAGATAAAGCAGGGAAAGTCAGCCCTGACTTTGTTTCCACTCCTCCCTTATTAAAACTGCGGGCAGAACAAAAGAATACATTGCAGGTAACAAAAGTTGTCAATTTACCATCAGACAGAGAATCACTTTATTGGCTGAATGTTAAGTTTGTTGCCCCAAGCAGTGAAGGTAAGGAGAATGTTTTACGTTATTCCATGACAAACAGAATAAAGATAATTTACCGCCCTGAATCATTAGATAATAAAGACATTGAAACCTATGTTGATAAATTAACCTGGAGTGTATCCGGAAATACTCTCACAGTAAAAAACCCAACACCCTACTATGTTAATGTTTCAAAGTTAGTCATTAACAATCAGGAAATAAAATTATCTGATGGTTATCTGACCCCAAAATCCGAAGAAACACTGAAGTTATCCGGTACAACCAATGCACCCGCACATATCAGGCTGACATATATAAATGACTATGGCAAAGCAATTGAGAAAAACGTCTCTGTTAAATAAATCATGATGACTACTATGAAAAATACGTATAATAAAAACAACTTCATATT