Homologs in group_2834

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10500 FBDBKF_10500 78.9 Morganella morganii S1 - Carotenoid biosynthesis protein
EHELCC_14835 EHELCC_14835 78.9 Morganella morganii S2 - Carotenoid biosynthesis protein
NLDBIP_14665 NLDBIP_14665 78.9 Morganella morganii S4 - Carotenoid biosynthesis protein
LHKJJB_14680 LHKJJB_14680 78.9 Morganella morganii S3 - Carotenoid biosynthesis protein
HKOGLL_13300 HKOGLL_13300 78.9 Morganella morganii S5 - Carotenoid biosynthesis protein

Distribution of the homologs in the orthogroup group_2834

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2834

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14210
Feature type CDS
Gene -
Product hypothetical protein
Location 58808 - 59365 (strand: 1)
Length 558 (nucleotides) / 185 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2834
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Protein Sequence

MHLFFSVLLIVIIALAPAVLTGGLGAEYNVKIAVMGALLLLANMYLYRYRWGKVLVGVLTLLWGLNLSASAFFRREAGAQYIADLPALLHQRHTLSAADVLAENMGITGFFILVSVAYFGVVHLLSSVLPRRVIRNAGISLLLLSFILPVEYYAMEKDKTPGLTVYDHYLLGTPLYNLSSVTMAL

Flanking regions ( +/- flanking 50bp)

GTTAATGATTAACTGCGTTCCGCTTATTTATGTTACTTAAAAGTTAATTTATGCATCTGTTTTTTTCTGTTTTACTGATTGTGATTATTGCACTGGCACCCGCAGTATTAACCGGCGGGCTGGGCGCAGAGTACAATGTTAAAATTGCGGTAATGGGCGCATTGTTACTGTTGGCAAATATGTACCTTTACCGCTACCGCTGGGGAAAAGTGCTTGTCGGCGTACTGACATTATTGTGGGGATTGAATTTATCGGCATCTGCTTTTTTCCGCCGGGAGGCGGGAGCACAATATATAGCTGATCTTCCGGCTCTCCTCCATCAGAGACATACATTGTCTGCCGCAGATGTGCTGGCTGAAAATATGGGTATTACAGGATTCTTTATTCTTGTTTCAGTGGCTTATTTCGGGGTTGTTCATCTGTTGAGTAGCGTATTACCCCGCCGCGTTATTCGTAATGCCGGGATTTCATTACTGTTGCTGTCATTTATTTTACCGGTTGAATATTATGCTATGGAAAAAGATAAAACACCGGGTCTGACTGTATATGACCACTATCTGCTGGGCACTCCGTTGTATAATCTCTCATCTGTTACCATGGCACTGTAATGCCTGAATATACCCTTATTCATTCAAACTGCAGGTGCGTTGGCTGCACT