Homologs in group_1592

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10380 FBDBKF_10380 83.2 Morganella morganii S1 nudE ADP compounds hydrolase NudE
EHELCC_14715 EHELCC_14715 83.2 Morganella morganii S2 nudE ADP compounds hydrolase NudE
NLDBIP_14545 NLDBIP_14545 83.2 Morganella morganii S4 nudE ADP compounds hydrolase NudE
LHKJJB_14800 LHKJJB_14800 83.2 Morganella morganii S3 nudE ADP compounds hydrolase NudE
HKOGLL_13420 HKOGLL_13420 83.2 Morganella morganii S5 nudE ADP compounds hydrolase NudE
PMI_RS14935 PMI_RS14935 68.5 Proteus mirabilis HI4320 nudE ADP compounds hydrolase NudE

Distribution of the homologs in the orthogroup group_1592

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1592

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45799 2.27e-87 257 64 0 181 1 nudE ADP compounds hydrolase NudE Escherichia coli (strain K12)
Q8KP10 1.59e-08 55 27 2 132 1 act Methanol dehydrogenase activator Bacillus methanolicus
P54570 7.5e-07 50 26 4 179 1 nudF ADP-ribose pyrophosphatase Bacillus subtilis (strain 168)
Q5RCY2 3.96e-06 48 25 3 147 2 NUDT5 ADP-sugar pyrophosphatase Pongo abelii
Q9UKK9 4.59e-06 48 25 3 147 1 NUDT5 ADP-sugar pyrophosphatase Homo sapiens
Q9P791 6.65e-06 48 25 3 139 3 SPBP35G2.12 Uncharacterized Nudix hydrolase P35G2.12 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q01976 1.59e-05 47 26 4 136 1 YSA1 ADP-ribose pyrophosphatase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9JKX6 6e-05 45 24 2 125 1 Nudt5 ADP-sugar pyrophosphatase Mus musculus
Q6AY63 8.96e-05 45 23 2 132 2 Nudt5 ADP-sugar pyrophosphatase Rattus norvegicus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14075
Feature type CDS
Gene nudE
Product ADP compounds hydrolase NudE
Location 28066 - 28620 (strand: 1)
Length 555 (nucleotides) / 184 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1592
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00293 NUDIX domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0494 Defense mechanisms (V) V 8-oxo-dGTP pyrophosphatase MutT and related house-cleaning NTP pyrophosphohydrolases, NUDIX family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08312 ADP compounds hydrolase [EC:3.6.1.-] Purine metabolism
Metabolic pathways		 -

Protein Sequence

MTALQKPKIIRTDNIAQSRLFSIQSVALEFSNGVERVYERMRPANRESVLIVPVIGNELILIQEYAAGIEKYELGFPKGAIDPGEDMLTAANRELKEEIGFGAQTLAPLRKVTMSPSYFSGRMNILLATGLYPEKLEGDEPEPLVQMRWPISNMMDLLTHPDFNEARNITALFLAQQYLSQIGE

Flanking regions ( +/- flanking 50bp)

CACAACGCGATATATTAATCCGCGTTTTTACAAAACGCACCGGGGCATACATGACAGCACTACAAAAACCAAAAATTATCCGTACAGACAATATCGCCCAATCCCGTTTGTTCAGTATTCAGTCTGTTGCACTGGAATTCAGTAACGGCGTGGAGCGTGTTTATGAGCGAATGCGTCCGGCTAACCGTGAATCTGTTTTAATCGTTCCGGTTATCGGGAACGAACTCATTTTAATTCAGGAATATGCAGCCGGTATCGAAAAATACGAGCTGGGTTTCCCTAAAGGTGCAATCGATCCCGGCGAGGACATGCTGACTGCGGCTAACCGGGAACTGAAAGAAGAAATCGGTTTTGGTGCGCAGACACTGGCTCCTTTGCGTAAAGTCACGATGTCACCGTCTTATTTTTCGGGGCGGATGAATATTTTGCTAGCCACCGGTTTATATCCCGAGAAACTGGAGGGCGATGAACCTGAGCCACTGGTTCAGATGCGCTGGCCGATCAGCAATATGATGGATTTACTGACACATCCTGATTTTAACGAAGCCCGCAATATTACCGCACTGTTCCTGGCGCAACAATATTTGTCACAGATCGGGGAATGACCTATTTTTAACACAAATAAACGGATTCCAATCATTAAAGAAAGGTATCA