Homologs in group_3084

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18870 FBDBKF_18870 85.1 Morganella morganii S1 cobK cobalt-precorrin-6A reductase
EHELCC_17065 EHELCC_17065 85.1 Morganella morganii S2 cobK cobalt-precorrin-6A reductase
NLDBIP_18445 NLDBIP_18445 85.1 Morganella morganii S4 cobK cobalt-precorrin-6A reductase
LHKJJB_09180 LHKJJB_09180 85.1 Morganella morganii S3 cobK cobalt-precorrin-6A reductase
HKOGLL_08730 HKOGLL_08730 85.1 Morganella morganii S5 cobK cobalt-precorrin-6A reductase

Distribution of the homologs in the orthogroup group_3084

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3084

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q05591 1.37e-77 238 49 0 236 3 cbiJ Cobalt-precorrin-6A reductase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P72711 5.63e-33 124 31 3 250 3 cbiJ Cobalt-precorrin-6A reductase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O87691 1.74e-32 122 32 3 235 1 cbiJ Cobalt-precorrin-6A reductase Priestia megaterium
Q57972 4.17e-30 116 31 6 246 3 cbiJ Cobalt-precorrin-6A reductase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O27083 9.04e-30 116 33 5 251 3 cbiJ Cobalt-precorrin-6A reductase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Q977V1 6.64e-25 102 28 6 240 3 cbiJ Cobalt-precorrin-6A reductase Methanococcus maripaludis
Q53139 7.54e-14 72 30 9 253 3 cobK Precorrin-6A reductase Rhodococcus erythropolis
P21920 1.53e-12 68 29 11 248 1 cobK Precorrin-6A reductase Sinorhizobium sp.
P9WP89 8.53e-10 60 25 9 256 1 cobK Precorrin-6A reductase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP88 8.53e-10 60 25 9 256 3 cobK Precorrin-6A reductase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
O68098 1.24e-09 60 24 4 229 1 cobK Precorrin-6A reductase Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13725
Feature type CDS
Gene -
Product cobalt-precorrin-6A reductase
Location 380410 - 381198 (strand: 1)
Length 789 (nucleotides) / 262 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3084
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF02571 Precorrin-6x reductase CbiJ/CobK

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2099 Coenzyme transport and metabolism (H) H Precorrin-6x reductase

Kegg Ortholog Annotation(s)

Protein Sequence

MIPRGLLIFGGTGDARLLCGRLDEQGVAYRLSVATPAGRQQAAGLQGEIVEGRMDANEMADFCRRHEIGVLADLSHPYAAVLSENILQVQRELGIPLVRYNRPSHIDAVDNPLVHKVDSIDSACELAMQLGERILLTTGSKQLADYIARLPGKTVLARVLPTQDVLAQCESYGLTIDQIFALKGPFSAEFNESFYRYCNADVVITKESGAQGGFSEKVAPCLALGIPCIVVVRPQTQVPGDVTELNNLSGVEQYLVSRFSVC

Flanking regions ( +/- flanking 50bp)

TCCACCTATATCAGTGATGATTTGATGATCACACCACGGGGATACGTACTGTGATCCCGCGCGGGCTGCTGATTTTCGGCGGGACCGGAGATGCCCGCCTGCTCTGCGGGCGCCTGGATGAACAGGGAGTCGCTTACCGGCTCTCTGTCGCCACACCGGCAGGTCGTCAGCAGGCTGCGGGGTTACAGGGTGAGATCGTCGAAGGCCGGATGGATGCAAATGAGATGGCAGATTTCTGCCGCCGTCATGAGATTGGCGTACTGGCTGATCTCTCCCATCCATACGCCGCTGTACTCAGTGAGAATATCTTACAGGTGCAGCGCGAGCTGGGAATTCCGCTGGTGCGTTATAACCGCCCGAGTCACATTGACGCCGTTGATAACCCGCTGGTGCATAAAGTGGACTCCATTGACAGCGCCTGTGAACTGGCGATGCAGCTCGGGGAGCGGATTCTGCTGACAACGGGCAGCAAACAACTGGCGGACTATATTGCGCGCCTGCCGGGTAAAACCGTGCTGGCACGCGTTTTACCGACACAGGATGTTCTCGCACAGTGTGAATCTTACGGGCTGACTATCGACCAGATTTTTGCCCTGAAAGGCCCGTTTTCTGCTGAGTTTAATGAATCCTTTTACCGCTACTGCAATGCAGATGTGGTTATCACCAAAGAGTCCGGCGCACAGGGCGGATTCAGTGAAAAAGTCGCCCCCTGCCTGGCGCTGGGCATTCCCTGCATTGTCGTGGTTCGCCCGCAGACACAGGTGCCCGGTGATGTGACTGAATTAAATAATCTTTCCGGGGTAGAGCAGTACTTGGTATCCCGTTTTTCTGTCTGTTGATTTACTGAGGTTATGAGATGAAAAAAGCGTTATTAGTGATTAGTTTCGGC