Homologs in group_3649

Help

3 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS08455 F4V73_RS08455 32.8 Morganella psychrotolerans - molecular chaperone
F4V73_RS10245 F4V73_RS10245 25.8 Morganella psychrotolerans - molecular chaperone
PMI_RS12530 PMI_RS12530 26.4 Proteus mirabilis HI4320 - molecular chaperone

Distribution of the homologs in the orthogroup group_3649

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3649

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P59590 2.34e-20 89 31 9 238 3 fimC Chaperone protein FimC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P62609 8.09e-20 88 28 6 226 1 focC Chaperone protein FocC Escherichia coli
P62610 8.09e-20 88 28 6 226 3 focC Chaperone protein FocC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P31697 1.38e-19 87 31 9 238 1 fimC Chaperone protein FimC Escherichia coli (strain K12)
P42914 2.1e-19 87 29 10 247 2 yraI Probable fimbrial chaperone YraI Escherichia coli (strain K12)
Q8X5E4 1.06e-18 85 28 9 236 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli O157:H7
P75856 1.66e-18 84 28 9 236 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli (strain K12)
P43661 2.79e-16 78 32 6 186 3 lpfB Chaperone protein LpfB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P33342 3.16e-15 75 26 7 230 2 yehC Probable fimbrial chaperone YehC Escherichia coli (strain K12)
P45991 1.6e-14 73 27 9 237 3 hifB Chaperone protein HifB Haemophilus influenzae
Q8X5K6 1.63e-14 73 34 9 200 2 lpfB Probable fimbrial chaperone LpfB Escherichia coli O157:H7
P33409 5.51e-14 72 24 5 234 3 fimB Chaperone protein FimB/FhaD Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P35757 1.69e-13 71 27 7 208 3 hifB Chaperone protein HifB Haemophilus influenzae
P77249 1.94e-12 68 25 6 235 2 sfmC Probable fimbrial chaperone SfmC Escherichia coli (strain K12)
P69966 3.8e-12 67 25 8 240 3 psaB Chaperone protein PsaB Yersinia pseudotuberculosis serotype I (strain IP32953)
P69965 3.8e-12 67 25 8 240 3 psaB Chaperone protein PsaB Yersinia pestis
P37923 1.09e-11 65 32 8 201 3 fimC Chaperone protein FimC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P26926 5e-11 64 24 9 226 1 caf1M Chaperone protein caf1M Yersinia pestis
P46004 2.49e-10 62 25 9 257 3 aggD Chaperone protein AggD Escherichia coli
P33407 8.74e-10 60 24 9 258 3 myfB Chaperone protein MyfB Yersinia enterocolitica
P15483 7.32e-09 58 26 8 224 3 None Chaperone protein CS3-1 Escherichia coli
P53516 1.5e-08 57 25 6 202 3 afaB Chaperone protein AfaB Escherichia coli
P33128 1.61e-08 57 30 9 171 1 yadV Probable fimbrial chaperone YadV Escherichia coli (strain K12)
P53520 2.69e-08 56 27 9 195 3 pmfD Chaperone protein PmfD Proteus mirabilis (strain HI4320)
P21646 4.07e-08 55 27 8 198 3 mrkB Chaperone protein MrkB Klebsiella pneumoniae
P53519 1.07e-07 54 24 5 216 3 cssC Chaperone protein CssC Escherichia coli
P25401 1.44e-07 54 25 8 218 1 faeE Chaperone protein FaeE Escherichia coli
Q05433 1.72e-07 54 26 7 192 3 clpE Chaperone protein ClpE Escherichia coli
P75749 3.23e-07 53 25 6 170 3 ybgP Uncharacterized fimbrial chaperone YbgP Escherichia coli (strain K12)
P53518 4.99e-07 52 23 5 216 3 cssC Chaperone protein CssC Escherichia coli
P77599 5.66e-07 52 25 6 166 2 yfcS Probable fimbrial chaperone YfcS Escherichia coli (strain K12)
P33387 1.54e-06 51 26 8 219 3 sefB Chaperone protein SefB Salmonella enteritidis
P15319 0.000357 44 25 7 185 1 papD Chaperone protein PapD Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13325
Feature type CDS
Gene -
Product molecular chaperone
Location 294750 - 295502 (strand: 1)
Length 753 (nucleotides) / 250 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000003
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3649
Orthogroup size 4
N. genomes 2

Actions

Genomic region

Domains

PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain
PF02753 Pili assembly chaperone PapD, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3121 Extracellular structures (W) W P pilus assembly protein, chaperone PapD

Protein Sequence

MKYLFITLCILLSSLTNVQAAPDNSGGLSLHVTRVIFHEDDRKGVTLNIINNSDNDYLLQSAVRDIDPQTGGVSQSERKKMPFIITPPLDKFAAHSEKTLHIRRINSITLSDKNESAFFISLKAIPVTEQPDAADNSIVLATVINLKLFYRPKELTRDFIYASSSLPVLCKKGNILIAKNNTPYWLVFSSLKTDKENIGEEQLRHMVPPHENYPYKIQSDLNHQQAEWTLIDESGWITPSEKQTISDCSQ

Flanking regions ( +/- flanking 50bp)

AGAAGTTTCACTACAGTGTCAGTAAAACTTATCAGAAAATGGTACTTATTATGAAATATCTTTTTATAACATTATGTATTTTATTAAGTTCGCTGACAAATGTTCAGGCAGCACCTGATAATAGCGGCGGATTATCCTTACATGTTACCCGGGTTATTTTTCATGAAGATGACCGGAAAGGCGTTACGCTCAACATTATAAATAACTCAGATAATGACTACCTTCTTCAATCTGCTGTCCGTGATATTGATCCGCAAACAGGAGGCGTAAGTCAGTCAGAACGTAAAAAGATGCCATTTATCATCACACCACCGCTTGATAAATTTGCTGCACACAGTGAAAAGACACTGCATATTCGCAGGATAAACAGTATTACTCTGTCAGATAAGAATGAATCGGCTTTCTTTATTTCGTTAAAAGCAATTCCGGTTACCGAGCAACCTGATGCTGCTGATAATAGTATTGTTCTGGCTACTGTTATTAATCTAAAATTATTTTATCGGCCAAAAGAATTAACCCGGGATTTCATTTATGCATCATCTTCATTACCGGTGTTATGTAAAAAAGGCAATATACTGATTGCAAAAAACAATACGCCATACTGGCTGGTATTCAGTTCTCTTAAAACAGATAAAGAAAATATCGGCGAAGAGCAATTACGCCATATGGTACCACCGCATGAAAATTATCCGTATAAAATTCAAAGTGATTTAAATCATCAGCAAGCGGAATGGACACTAATTGATGAAAGTGGCTGGATAACACCATCAGAAAAACAAACTATATCTGATTGCAGCCAATAGTAATTATTATTTTTCAGGTGAAAAAATGACAACAATAAAAAGAAGTATAA