Homologs in group_3729

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2 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS08440 F4V73_RS08440 29.1 Morganella psychrotolerans - fimbrial protein
F4V73_RS08445 F4V73_RS08445 26.9 Morganella psychrotolerans - fimbrial-like protein

Distribution of the homologs in the orthogroup group_3729

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3729

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13310
Feature type CDS
Gene -
Product fimbrial protein
Location 290829 - 291422 (strand: 1)
Length 594 (nucleotides) / 197 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3729
Orthogroup size 3
N. genomes 1

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MMLVACWNLPVNIKKTIISLLILLPFFQAKAATTAQLNFTANILRLSCELSVSNSSIRFNRVIASQLKGSQLSDIKQFSVNIKNCTGLPGTGLKPQVVISGNGFKSQDGKWIFRQDNSKLKNIGAMIFHKNQSPTYQDKELKPGDRIEFNYNGQDFPIGESINFHAGLTCGDPITCNKAQKEPGEMKAIVYFDFRYD

Flanking regions ( +/- flanking 50bp)

CCTGCTGAATAAAATGCTCACTGACAAAAAAATAAAATGGACAATTATCAATGATGCTGGTGGCTTGCTGGAATTTACCCGTTAACATAAAAAAAACAATTATCAGTTTATTGATATTATTACCATTTTTCCAAGCTAAGGCAGCAACGACTGCCCAGTTAAACTTTACAGCAAATATCTTACGTTTATCCTGTGAATTATCAGTATCAAATTCAAGTATACGATTTAACCGGGTAATAGCGTCACAACTGAAAGGATCACAGTTGTCAGATATAAAACAATTTTCGGTCAATATTAAAAATTGCACCGGATTACCCGGAACCGGGTTGAAACCACAGGTGGTTATCTCCGGAAATGGATTTAAAAGTCAGGATGGAAAGTGGATTTTCAGACAGGATAATTCGAAACTCAAAAATATTGGCGCGATGATATTTCATAAAAACCAGTCGCCAACATACCAGGACAAAGAATTAAAGCCCGGAGACAGAATTGAATTTAACTACAATGGACAGGATTTCCCTATAGGTGAGTCCATAAATTTTCATGCCGGGCTTACGTGTGGAGATCCCATAACCTGTAATAAAGCACAAAAAGAACCGGGTGAAATGAAAGCCATTGTTTATTTTGATTTCAGATATGACTAAATGAAAAAACATATATTTAATAACATTATTTTTACAACATTATTCCTATT