Homologs in group_3690

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3 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS08425 F4V73_RS08425 34.8 Morganella psychrotolerans - fimbrial protein
F4V73_RS10280 F4V73_RS10280 26.9 Morganella psychrotolerans - fimbrial protein
PMI_RS12555 PMI_RS12555 29.9 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_3690

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3690

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P22595 4.16e-06 48 32 10 176 3 fimA Type-1 fimbrial protein subunit Serratia marcescens

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13300
Feature type CDS
Gene -
Product fimbrial protein
Location 289527 - 290081 (strand: 1)
Length 555 (nucleotides) / 184 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3690
Orthogroup size 4
N. genomes 2

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MHKKLIVLSIAALFGTTAAQAANQTSVEFLGNVQAISCDINVNGQSQVSLGTVKTSDFATANSAITAGQKEFQIALTGCDTPAAAGTASLEVSGDTVSGTNNIFLQKSKNPTSNVGVMLMNGANPVENGSLVEIGKVTEGEGGALNPLTDNTVTLTAAYASTATAQNVTVGTFNAPVLFSFVYQ

Flanking regions ( +/- flanking 50bp)

TAAAAATCAACAATCCGTTTATTATTTGTATAAACAAACTGGGGTATATTATGCATAAGAAATTAATCGTTTTATCTATTGCTGCTTTATTTGGTACTACCGCTGCTCAGGCTGCAAACCAGACAAGTGTCGAGTTTTTAGGTAACGTTCAGGCAATCAGCTGTGATATTAACGTGAATGGTCAGAGCCAGGTCTCTCTGGGTACAGTAAAAACATCTGACTTTGCAACTGCCAACAGCGCTATCACTGCCGGGCAGAAAGAATTTCAGATTGCATTAACCGGCTGTGACACACCTGCTGCCGCAGGTACTGCATCACTGGAAGTGAGCGGTGATACCGTATCAGGTACCAATAATATCTTCCTGCAGAAATCTAAAAACCCAACCAGTAATGTCGGTGTAATGCTGATGAATGGTGCAAATCCTGTAGAAAACGGTTCACTCGTTGAAATTGGTAAAGTAACTGAAGGGGAAGGAGGCGCCTTAAATCCTTTAACTGATAATACCGTTACCTTAACCGCTGCGTATGCATCAACTGCAACAGCACAAAACGTGACAGTCGGTACTTTCAACGCACCTGTTCTGTTCTCATTTGTTTATCAGTAATTAATTTTCAGGGAGGATATACACATTGTCCGGATTACCCGGAAGACTGT