Homologs in group_1351

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07890 FBDBKF_07890 93.1 Morganella morganii S1 tm-1N ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family
EHELCC_13720 EHELCC_13720 93.1 Morganella morganii S2 tm-1N ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family
NLDBIP_14165 NLDBIP_14165 93.1 Morganella morganii S4 tm-1N ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family
LHKJJB_08685 LHKJJB_08685 93.1 Morganella morganii S3 tm-1N ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family
HKOGLL_08235 HKOGLL_08235 93.1 Morganella morganii S5 tm-1N ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family
PMI_RS00735 PMI_RS00735 75.2 Proteus mirabilis HI4320 - Tm-1-like ATP-binding domain-containing protein

Distribution of the homologs in the orthogroup group_1351

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1351

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZAG3 0.0 555 69 1 393 3 YPO3839 UPF0261 protein YPO3839/y0391/YP_3209 Yersinia pestis
A8GL43 1.19e-172 491 61 0 399 3 Spro_4740 UPF0261 protein Spro_4740 Serratia proteamaculans (strain 568)
Q7VYV4 7.76e-165 471 61 4 395 3 BP1203 UPF0261 protein BP1203 Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
Q7WHB9 2.01e-164 470 60 4 395 3 BB3289 UPF0261 protein BB3289 Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
Q7W9E3 1.62e-163 468 60 4 395 3 BPP1817 UPF0261 protein BPP1817 Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
A4FLF6 7.82e-151 436 55 3 395 3 SACE_5696 UPF0261 protein SACE_5696 Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338)
P55606 8.64e-136 397 51 2 397 3 NGR_a02150 UPF0261 protein y4oU Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q981G1 6.75e-134 392 51 1 391 3 mll9388 UPF0261 protein mll9388 Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
Q92YY3 1.52e-133 391 52 4 394 3 RA0729 UPF0261 protein RA0729 Rhizobium meliloti (strain 1021)
Q98GC6 6.14e-118 351 52 3 388 3 mlr3387 UPF0261 protein mlr3387 Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
A7M6E8 1.18e-89 289 41 8 420 1 tm-1 ToMV susceptible protein tm-1(GCR26) Solanum lycopersicum
A7M6E7 1.53e-89 289 41 8 420 1 Tm-1 ToMV resistance protein Tm-1(GCR237) Solanum lycopersicum
Q893M2 6.76e-87 272 41 5 388 3 CTC_01794 UPF0261 protein CTC_01794 Clostridium tetani (strain Massachusetts / E88)
Q8FUQ2 1.72e-48 173 32 9 397 3 BRA1168 UPF0261 protein BRA1168/BS1330_II1159 Brucella suis biovar 1 (strain 1330)
Q8YDP7 1.68e-47 170 32 9 397 3 BMEII0128 UPF0261 protein BMEII0128 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13090
Feature type CDS
Gene -
Product Tm-1-like ATP-binding domain-containing protein
Location 234372 - 235586 (strand: 1)
Length 1215 (nucleotides) / 404 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000003
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1351
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF06792 Uncharacterised protein family (UPF0261)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5441 Defense mechanisms (V) V ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family

Protein Sequence

MTNNKGAIYIATTLDTKSDEIFYISGLIQRTGLTVRTVDLTTKPGQLAREADVCARDVAACHPDGESAVFCGDRGQAIAAMAVAFECFIAKQHDIAALLGLGGSGGTALITPAMQSLPIGIPKLMVSTMASGDISGYIGASDIAMLYSVTDVSGLNRISRKVLRNAANQIAGAVYFCQEEQVTDKPAIALTMFGVTTPCIQQLSKELDTDYDCLVFHATGSGGKAMEKLADDKLFDSILDLTTTEVCDYLFGGVLACDEDRFGAIARSETPYIGSCGALDMVNFGRPSTVPEKYTDRQFYHHNAQVTLMRTTPAENAEMGRWIAEKLNRCNGDVIFIIPEGGFSALDAEGAPFWSPQADRAFIDAFETHYKQTEKRILHKCPYHINDPEFTRFVINQHQILRAK

Flanking regions ( +/- flanking 50bp)

CTTTTGTTATCATGCGTTATCAGACATCCGGTATACCTTTGAGGTTAACAATGACTAACAATAAAGGCGCTATCTATATCGCCACAACGCTTGATACGAAAAGTGATGAAATTTTTTACATCAGCGGGTTAATTCAGCGCACCGGCTTAACCGTACGGACGGTAGATTTAACCACCAAACCCGGTCAGTTAGCACGGGAAGCGGATGTTTGCGCCCGCGATGTTGCAGCATGCCACCCTGATGGTGAAAGTGCTGTGTTTTGCGGCGACCGCGGTCAGGCTATTGCGGCGATGGCTGTCGCATTTGAGTGCTTTATTGCAAAACAACATGATATAGCAGCACTTCTCGGTTTAGGCGGATCCGGTGGAACGGCACTGATTACACCAGCAATGCAATCCCTGCCAATCGGCATTCCCAAACTCATGGTTTCCACCATGGCATCCGGCGACATTTCCGGCTATATAGGCGCAAGCGATATTGCCATGCTTTACTCTGTCACTGATGTCTCCGGCCTGAACCGAATTTCACGTAAAGTTCTCCGTAACGCGGCAAATCAAATTGCCGGGGCGGTTTACTTTTGTCAGGAAGAGCAGGTAACTGATAAACCTGCCATTGCGCTGACGATGTTTGGTGTCACCACACCCTGTATTCAGCAACTCAGTAAAGAGCTGGATACGGATTATGATTGTCTGGTCTTTCACGCAACCGGCAGCGGCGGTAAGGCAATGGAAAAACTGGCGGATGATAAATTATTCGACAGCATCCTGGATCTGACCACGACAGAAGTGTGTGATTATCTTTTTGGCGGCGTTCTTGCCTGTGATGAAGACCGTTTTGGTGCCATTGCCCGCTCAGAAACGCCGTATATCGGCTCCTGCGGCGCACTTGATATGGTGAATTTCGGCCGTCCGTCTACCGTACCGGAGAAGTACACAGACCGGCAGTTTTATCATCATAATGCCCAGGTCACGCTGATGCGGACCACCCCTGCAGAAAATGCAGAAATGGGACGCTGGATAGCTGAAAAACTCAACCGCTGTAACGGTGACGTCATTTTTATCATTCCTGAAGGTGGCTTTTCCGCGCTGGATGCCGAAGGTGCACCGTTCTGGTCACCACAAGCTGACCGCGCTTTTATTGATGCTTTTGAAACTCATTATAAACAAACAGAAAAACGTATTTTACACAAATGCCCGTATCATATTAATGACCCGGAATTTACCCGATTTGTCATTAACCAACACCAGATACTACGGGCAAAATAAGGAGACACACCATGCCACTTTCCCGTGACGCACTACTTAAAAAATTCAAT