COG5441


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG5441, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family
Function(s) descr. Defense mechanisms (V)

Occurence in the database

COG5441 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1294 FBDBKF_07890 106882 108096 -1 tm-1N ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family Morganella morganii S1
1 group_1294 EHELCC_13720 81076 82290 -1 tm-1N ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family Morganella morganii S2
2 group_1294 NLDBIP_14165 101951 103165 -1 tm-1N ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family Morganella morganii S4
3 group_1294 LHKJJB_08685 56584 57798 1 tm-1N ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family Morganella morganii S3
4 group_1294 HKOGLL_08235 56584 57798 1 tm-1N ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family Morganella morganii S5
5 group_1294 F4V73_RS13090 234372 235586 1 Tm-1-like ATP-binding domain-containing protein Morganella psychrotolerans
6 group_1294 PMI_RS00735 188681 189892 -1 Tm-1-like ATP-binding domain-containing protein Proteus mirabilis HI4320