Homologs in group_1868

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13960 FBDBKF_13960 88.2 Morganella morganii S1 mltD murein transglycosylase D
EHELCC_11630 EHELCC_11630 88.2 Morganella morganii S2 mltD murein transglycosylase D
NLDBIP_11975 NLDBIP_11975 88.2 Morganella morganii S4 mltD murein transglycosylase D
LHKJJB_11835 LHKJJB_11835 88.2 Morganella morganii S3 mltD murein transglycosylase D
HKOGLL_10445 HKOGLL_10445 88.2 Morganella morganii S5 mltD murein transglycosylase D
PMI_RS01080 PMI_RS01080 54.3 Proteus mirabilis HI4320 mltD murein transglycosylase D

Distribution of the homologs in the orthogroup group_1868

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1868

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AEZ7 2.3e-142 418 47 9 471 1 mltD Membrane-bound lytic murein transglycosylase D Escherichia coli (strain K12)
P0AEZ8 2.3e-142 418 47 9 471 3 mltD Membrane-bound lytic murein transglycosylase D Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P32820 2.88e-32 125 46 1 123 3 tbtA Putative tributyltin chloride resistance protein Alteromonas sp. (strain M-1)
P39046 1.11e-11 70 30 5 140 1 EHR_05900 Muramidase-2 Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258 / NCTC 12367 / WDCM 00089 / R)
P39046 2.18e-11 69 32 4 110 1 EHR_05900 Muramidase-2 Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258 / NCTC 12367 / WDCM 00089 / R)
P39046 8.13e-10 64 32 3 123 1 EHR_05900 Muramidase-2 Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258 / NCTC 12367 / WDCM 00089 / R)
P39046 2.82e-08 60 23 3 169 1 EHR_05900 Muramidase-2 Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258 / NCTC 12367 / WDCM 00089 / R)
P54421 2.31e-10 65 41 1 91 1 lytE Probable peptidoglycan endopeptidase LytE Bacillus subtilis (strain 168)
P54421 0.000795 45 29 2 95 1 lytE Probable peptidoglycan endopeptidase LytE Bacillus subtilis (strain 168)
Q8CMN2 3.4e-10 64 31 4 145 3 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q8CMN2 7.71e-07 54 32 4 110 3 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HRU2 3.4e-10 64 31 4 145 3 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q5HRU2 7.71e-07 54 32 4 110 3 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
A0A1X7S690 7.16e-10 62 31 3 122 2 Mg3LysM Secreted LysM effector Mg3LysM Zymoseptoria tritici (strain ST99CH_3D7)
A0A1X7S690 3.65e-09 60 33 3 106 2 Mg3LysM Secreted LysM effector Mg3LysM Zymoseptoria tritici (strain ST99CH_3D7)
F9XMT4 1.57e-09 61 31 3 122 2 Mg3LysM Secreted LysM effector Mg3LysM Zymoseptoria tritici (strain CBS 115943 / IPO323)
F9XMT4 3.58e-09 60 33 3 106 2 Mg3LysM Secreted LysM effector Mg3LysM Zymoseptoria tritici (strain CBS 115943 / IPO323)
Q49UX4 1.61e-09 62 36 3 110 3 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q49UX4 7.19e-06 51 31 3 108 3 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
O31852 3.61e-09 62 41 2 92 1 cwlS D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS Bacillus subtilis (strain 168)
O31852 1.87e-06 53 37 2 101 1 cwlS D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS Bacillus subtilis (strain 168)
O31852 4.32e-05 49 33 3 118 1 cwlS D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS Bacillus subtilis (strain 168)
O31976 8.37e-07 55 35 4 112 3 yomI SPbeta prophage-derived uncharacterized transglycosylase YomI Bacillus subtilis (strain 168)
O64046 8.52e-07 55 35 4 112 3 yomI Probable tape measure protein Bacillus phage SPbeta
O31608 1.68e-06 51 31 3 113 1 cwlQ Bifunctional muramidase/lytic transglycosylase CwlQ Bacillus subtilis (strain 168)
Q4L3C1 2.62e-06 52 34 3 111 3 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus haemolyticus (strain JCSC1435)
Q4L3C1 9.81e-06 51 31 3 110 3 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus haemolyticus (strain JCSC1435)
Q7A1T4 3.03e-06 52 32 3 114 3 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus aureus (strain MW2)
P0C1U7 3.03e-06 52 32 3 114 3 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus aureus
Q6GC24 3.03e-06 52 32 3 114 3 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus aureus (strain MSSA476)
Q7A7E0 3.03e-06 52 32 3 114 1 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus aureus (strain N315)
Q5HIL2 3.03e-06 52 32 3 114 3 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus aureus (strain COL)
Q2G0U9 3.03e-06 52 32 3 114 1 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FJH7 3.03e-06 52 32 3 114 3 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus aureus (strain USA300)
Q2YVT4 3.38e-06 52 32 3 114 3 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus aureus (strain bovine RF122 / ET3-1)
O07532 4.4e-06 52 35 2 106 1 lytF Peptidoglycan endopeptidase LytF Bacillus subtilis (strain 168)
O07532 0.000434 46 29 3 113 1 lytF Peptidoglycan endopeptidase LytF Bacillus subtilis (strain 168)
Q4WRR0 6.98e-06 51 24 7 195 3 ldpB Secreted LysM effector ldpB Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293)
Q8DVU8 1.66e-05 49 44 0 49 3 SMU_367 Putative hydrolase SMU_367 Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
P07540 2.53e-05 49 35 2 96 3 15 Endolysin Bacillus phage PZA
P11187 2.58e-05 49 35 2 96 1 15 Endolysin Bacillus phage phi29
Q9P403 2.7e-05 48 28 5 142 1 CIH1 Intracellular hyphae protein 1 Colletotrichum lindemuthianum
Q9CLB8 4.51e-05 49 32 6 134 3 mltC Membrane-bound lytic murein transglycosylase C Pasteurella multocida (strain Pm70)
A0A0H3C9Q9 4.68e-05 49 38 3 91 3 dipM Cell division protein DipM Caulobacter vibrioides (strain NA1000 / CB15N)
Q2G0D4 6.58e-05 48 30 2 94 1 SAOUHSC_00671 Probable autolysin SsaALP Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q9K3E4 0.000105 48 33 2 112 1 sleL Cortical fragment-lytic enzyme Bacillus cereus
B8F6F0 0.000126 47 28 4 143 3 mltC Membrane-bound lytic murein transglycosylase C Glaesserella parasuis serovar 5 (strain SH0165)
P0DPJ9 0.000136 47 33 2 112 2 sleL Cortical fragment-lytic enzyme Bacillus anthracis
Q37896 0.000162 47 32 3 100 3 15 Endolysin Bacillus phage B103
P44888 0.000181 47 36 4 117 3 slt Putative soluble lytic murein transglycosylase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P37710 0.000296 47 29 2 93 1 EF_0799 Autolysin Enterococcus faecalis (strain ATCC 700802 / V583)
Q6GJK9 0.000402 46 32 3 114 3 sle1 N-acetylmuramoyl-L-alanine amidase sle1 Staphylococcus aureus (strain MRSA252)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12815
Feature type CDS
Gene mltD
Product murein transglycosylase D
Location 162322 - 163719 (strand: 1)
Length 1398 (nucleotides) / 465 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1868
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01464 Transglycosylase SLT domain
PF01476 LysM domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0741 Cell wall/membrane/envelope biogenesis (M) M Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08307 peptidoglycan lytic transglycosylase D [EC:4.2.2.29] - -

Protein Sequence

MKIKATLLAAAILLAGCQSTPPKTVQKSYQPSGNGFLLSAQQMEMAKASSVNPDEDIWGYIRDEMTMNIPDNDRVRAEELSYLSKKSYLHDVTLRAEPYMYWIIGKIDERNMPMELVLLPIVESAFNPHATSSAQAAGLWQIIPSTGKANGLNQNQWVDDRRDVAASTRAALDLLERLNGMFGGDWALTLAAYNSGEGRVLRAMEANAAAGKPTDYWSLSLPKETMDYVPRIFALSNVIRNSDRNGVNLPAPNSERALARVNVGQQISLDMAAQLLDMPVAKLKDYNPSLKRGVTSPAGPHYLMLPKTKIDQLMSALSDDAVLNDIRLAVAKNNQRSNQLSTPAGRVKASEYKVKSGDSLYAIASRHKMTVTELTKLNGLKTTSAIKPGRTLQVKGSPVVKPSKAATKNAMRLAKYKVRQGDSYYGIAQRHGVSLKELMSWNSKVKMKDLHPGVELTVYLAGKRS

Flanking regions ( +/- flanking 50bp)

TATGATTGCTGAACTTAAAGACTAAATATAACGGTACTGACTCCGCCAACATGAAAATTAAAGCCACCTTACTTGCCGCTGCTATTTTGTTAGCGGGGTGCCAGAGTACACCACCCAAAACAGTTCAGAAATCTTATCAGCCCTCGGGTAACGGTTTTTTACTGTCTGCTCAGCAGATGGAAATGGCGAAAGCGTCATCCGTTAATCCGGACGAAGATATCTGGGGTTATATCCGTGATGAAATGACGATGAACATCCCGGACAATGACCGTGTCCGTGCTGAAGAACTGTCTTACCTGTCTAAAAAGAGCTATCTCCACGATGTGACACTCCGCGCAGAACCTTACATGTACTGGATCATCGGTAAAATCGATGAACGGAATATGCCGATGGAACTTGTTCTGCTGCCCATAGTGGAGAGTGCTTTTAACCCGCATGCCACCTCATCAGCACAGGCCGCCGGCTTATGGCAGATTATCCCGAGTACCGGTAAAGCGAACGGGCTGAACCAGAACCAGTGGGTCGATGATCGCCGAGATGTTGCCGCGTCAACCAGAGCCGCACTGGATCTGCTGGAGCGCCTCAACGGTATGTTCGGCGGAGACTGGGCGCTGACTCTTGCCGCGTATAACAGCGGTGAAGGACGTGTTCTGCGCGCAATGGAAGCCAATGCCGCTGCGGGCAAGCCGACCGATTACTGGTCGCTGTCATTACCGAAAGAAACCATGGATTATGTGCCGCGTATTTTTGCTCTGAGCAATGTTATCCGCAACAGTGATCGCAATGGAGTGAATTTACCGGCTCCGAATTCAGAACGCGCCCTGGCACGGGTCAATGTCGGGCAGCAAATCTCGCTCGATATGGCAGCACAACTGCTGGATATGCCGGTCGCAAAGCTGAAAGATTATAACCCGAGCCTGAAACGCGGTGTGACGTCACCGGCAGGTCCGCACTATCTGATGCTGCCGAAAACTAAAATTGATCAGTTGATGAGTGCGCTGTCTGATGATGCGGTATTGAATGATATCCGCCTTGCGGTCGCCAAAAATAACCAGCGCAGCAATCAGTTAAGTACACCGGCAGGTCGCGTAAAAGCGTCTGAATATAAGGTGAAGAGTGGTGATTCACTCTATGCGATAGCCTCACGTCATAAAATGACAGTCACTGAACTGACAAAACTGAACGGACTGAAAACCACCAGTGCTATCAAACCGGGCAGGACATTACAGGTAAAAGGCAGCCCGGTGGTTAAACCATCTAAAGCGGCAACCAAAAATGCCATGCGTCTGGCTAAGTACAAAGTGCGTCAGGGTGATTCTTACTACGGTATTGCACAGCGTCATGGTGTCAGCCTGAAAGAACTGATGTCCTGGAACAGTAAAGTGAAAATGAAAGATTTGCATCCGGGTGTTGAATTAACGGTTTATTTAGCCGGGAAGCGCAGCTGAGTTAAGCGCCATCTATTTGCCCTGTAAAAACAAAACCGCCGCTGACAGTT