Homologs in group_2922

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13870 FBDBKF_13870 76.1 Morganella morganii S1 lysX Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily
EHELCC_11540 EHELCC_11540 76.1 Morganella morganii S2 lysX Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily
NLDBIP_11885 NLDBIP_11885 76.1 Morganella morganii S4 lysX Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily
LHKJJB_11745 LHKJJB_11745 76.1 Morganella morganii S3 lysX Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily
HKOGLL_10355 HKOGLL_10355 76.1 Morganella morganii S5 lysX Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily

Distribution of the homologs in the orthogroup group_2922

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2922

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B9KXM5 0.000461 45 27 7 200 3 carB Carbamoyl phosphate synthase large chain Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12735
Feature type CDS
Gene -
Product ATP-grasp domain-containing protein
Location 146860 - 147918 (strand: 1)
Length 1059 (nucleotides) / 352 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2922
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF15632 ATP-grasp in the biosynthetic pathway with Ter operon

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0439 Lipid transport and metabolism (I) I Biotin carboxylase

Protein Sequence

MAHTIWLMEGLSSQRDLIQNIRLFSRKSQVNLTIFASHRQPRHEILSLADYALTEPKNDDERLSFILSVVKKHHIQVIHTGRHTAWFETHRDAITASGASLTTGAMSLSDLAVAEDKTRFADAMNTLGLPVVPSLRINSAAELRAALKNSPFSGTPLCIKPVQGIYGAGFWQFDDNASPMAMFQNPERRITTPEQYLCALESAGKFSPQVLMPYLPGPEYSVDILAENGQVLAAVARRKEGALQYLEHDGAAFELGCACAQAMHADGLINVQTRNDHHGQPLLLEINMRPSGGIGYTALSGLNLPGLFAFRRLRLMSADDVQEQNRTAFRPAAIRALTEAISYPLSLNNEIH

Flanking regions ( +/- flanking 50bp)

ATAAACTTCTTTCTAATTTACCGGATAACGGGAAACAGGAATAAACAATAATGGCTCATACTATCTGGCTTATGGAAGGGCTCTCTTCACAGCGGGACCTTATTCAGAACATCAGGCTATTTTCACGAAAGTCACAGGTTAATCTCACGATATTTGCCTCCCACCGGCAACCACGCCATGAGATCCTTTCTCTTGCAGATTATGCCCTGACAGAGCCAAAAAATGATGATGAGCGTCTGAGTTTTATTCTGTCCGTGGTGAAAAAGCATCATATTCAGGTTATCCATACCGGACGGCATACCGCCTGGTTTGAAACTCACCGTGACGCTATCACAGCAAGCGGTGCAAGCCTGACAACCGGAGCCATGTCCCTGTCCGATCTGGCCGTTGCAGAAGATAAAACCCGTTTTGCTGATGCCATGAATACGCTCGGACTGCCTGTCGTACCCTCCCTGCGTATTAATAGTGCGGCAGAACTGCGCGCCGCGCTGAAGAACTCACCTTTTTCCGGAACACCGCTGTGCATTAAACCCGTACAGGGTATTTATGGCGCAGGTTTCTGGCAGTTTGATGACAATGCATCCCCGATGGCAATGTTTCAGAACCCTGAACGGCGGATAACCACACCAGAGCAATATCTTTGTGCACTGGAAAGTGCCGGTAAATTTTCGCCGCAGGTTTTGATGCCGTACCTGCCCGGACCTGAATATTCCGTGGATATTCTCGCCGAAAACGGACAGGTTCTTGCGGCGGTCGCCCGCCGCAAAGAGGGTGCGCTGCAATACCTGGAGCATGATGGTGCAGCGTTTGAGCTGGGCTGTGCCTGCGCACAGGCGATGCATGCTGACGGACTGATCAATGTGCAGACCCGCAATGACCATCACGGACAGCCTTTGTTACTCGAAATCAACATGCGTCCGTCAGGCGGAATAGGCTATACCGCGCTCAGCGGGCTGAATCTGCCCGGTTTATTCGCATTTCGCCGTCTCAGGCTGATGAGTGCTGATGATGTGCAGGAGCAAAACCGCACAGCATTCCGCCCTGCGGCGATCCGCGCCCTGACTGAAGCCATCAGTTATCCGCTTTCACTGAACAATGAAATACACTGAGGTAAATATGTCCGGTTTATCACATCCCGGTCTTTACCGGTTTCAACTCT