Homologs in group_1844

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13765 FBDBKF_13765 94.7 Morganella morganii S1 lldP L-lactate permease
EHELCC_11435 EHELCC_11435 94.7 Morganella morganii S2 lldP L-lactate permease
NLDBIP_11780 NLDBIP_11780 94.7 Morganella morganii S4 lldP L-lactate permease
LHKJJB_11640 LHKJJB_11640 94.7 Morganella morganii S3 lldP L-lactate permease
HKOGLL_10250 HKOGLL_10250 94.7 Morganella morganii S5 lldP L-lactate permease
PMI_RS09535 PMI_RS09535 29.0 Proteus mirabilis HI4320 - L-lactate permease

Distribution of the homologs in the orthogroup group_1844

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1844

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q57251 0.0 605 59 0 506 3 HI_1218 Putative L-lactate permease Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8ZL63 3.62e-32 133 24 14 537 3 lldP L-lactate permease Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z2E3 1.45e-31 131 24 14 537 3 lldP L-lactate permease Salmonella typhi
P71067 1.04e-27 120 25 14 527 1 lutP L-lactate permease Bacillus subtilis (strain 168)
P33231 2.31e-27 119 24 14 537 1 lldP L-lactate permease Escherichia coli (strain K12)
P65253 2.75e-27 119 24 14 537 3 lldP L-lactate permease Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P65254 2.75e-27 119 24 14 537 3 lldP L-lactate permease Escherichia coli O157:H7
P55910 5.01e-21 100 24 11 454 2 lctP L-lactate permease Bacillus subtilis (strain 168)
Q9K5Z9 4.42e-16 84 26 12 447 3 lctP L-lactate permease Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q46839 8.38e-15 80 35 2 157 1 glcA Glycolate permease GlcA Escherichia coli (strain K12)
Q46839 1.51e-07 57 33 2 114 1 glcA Glycolate permease GlcA Escherichia coli (strain K12)
O33654 1.37e-14 79 23 13 412 3 lctP L-lactate permease Streptococcus iniae

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12635
Feature type CDS
Gene -
Product L-lactate permease
Location 123294 - 124910 (strand: 1)
Length 1617 (nucleotides) / 538 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1844
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02652 L-lactate permease

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1620 Energy production and conversion (C) C L-lactate permease

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03303 lactate permease - -

Protein Sequence

MAIFFSLAPIVMLIWMMTKRRSIPSYIALPLTATVVLCIQLFWFKTDFTLLGANIITAFMSVLTPITIIAGAIMLNKLMQISGAENVVRNWLENISPNPVAQLMIIGWAFAFTIEGASGFGTPAAIAAPILVGLGFPAMRVALLTLVMNSVPVSFGAVGTPTWFGFANLGLSEESVYQISHYSALIHFVAAFFIPLLALRFIVSWQEIRRNIVFILLSVLSCTVPYLLLAQVNYEFPALLGGAIGLGISVVIARAGIGLTKTEQKQEKKVIPFGQVIKAMAPTLLLIAILIVTRIHQLGIKGLLNSTNVIWEGTLGFLGHITLSDALIVRLSNVFGTPAAADYKTLYVPALIPFFLVVIIGIFLFRLTRGQVKTMFVQTAQQTNKPFIALFGALIMVNLMMQGGENAPVYIIGRSLAGATGENWLWFASYLGALGSFFSGSNTVSNLTFGGIQQSIAQTTGLNVNLTLALQSVGGAMGNMVCLNNIIAVCTILGISNAEGSIIKKTVVPMFIYGLIAAGMAFILTLGIHGTDFVTDIK

Flanking regions ( +/- flanking 50bp)

GTAGTTTGAATGAATAAGGGTATACAACAATAATAATATCTGAGGGCATTATGGCTATTTTTTTCAGTCTTGCACCTATCGTGATGTTAATCTGGATGATGACAAAACGCCGCAGTATCCCTTCCTACATTGCATTGCCGCTCACAGCGACAGTGGTACTTTGTATTCAGTTGTTCTGGTTTAAAACCGATTTTACGCTGCTCGGTGCCAATATTATTACTGCGTTTATGTCTGTTCTGACCCCGATAACCATTATCGCCGGGGCCATTATGCTAAATAAACTGATGCAGATAAGCGGCGCGGAAAATGTTGTCCGTAACTGGCTGGAGAACATCAGCCCGAACCCGGTCGCACAACTGATGATTATCGGCTGGGCATTTGCATTTACGATTGAAGGTGCCAGCGGGTTCGGCACACCGGCGGCGATTGCCGCACCCATCCTGGTGGGTCTGGGCTTTCCGGCAATGCGGGTCGCATTACTGACGCTGGTGATGAACTCCGTGCCTGTTTCATTCGGTGCGGTCGGTACGCCGACCTGGTTTGGTTTTGCCAATCTCGGGCTGTCAGAAGAGAGTGTGTATCAGATAAGCCATTATTCTGCCCTTATTCACTTTGTGGCAGCATTCTTCATTCCGCTGCTGGCGCTGCGCTTTATTGTCAGTTGGCAGGAAATCCGCCGTAATATCGTGTTTATTCTTCTCAGTGTCCTCTCCTGTACTGTGCCATATCTGCTGCTGGCGCAGGTTAATTATGAATTCCCGGCACTGCTGGGCGGTGCGATCGGTCTGGGTATTTCTGTGGTAATTGCCCGTGCCGGAATCGGACTGACCAAAACAGAGCAGAAACAAGAGAAGAAAGTCATTCCGTTCGGTCAGGTTATCAAAGCGATGGCGCCGACATTACTGCTGATCGCCATTCTGATTGTGACCCGCATCCACCAGCTCGGGATCAAAGGTCTGCTCAACAGCACCAATGTTATCTGGGAAGGCACGCTTGGTTTCCTCGGACATATCACGCTGAGTGATGCATTGATTGTCCGCCTGAGTAATGTCTTCGGCACCCCGGCGGCGGCAGATTACAAAACCCTGTATGTCCCGGCACTGATCCCGTTCTTTCTCGTCGTGATCATCGGCATTTTTCTGTTCAGACTGACGCGCGGGCAGGTAAAAACCATGTTTGTGCAGACCGCACAACAGACAAACAAGCCGTTTATTGCCCTGTTTGGTGCGCTAATCATGGTCAATCTGATGATGCAGGGCGGTGAAAATGCGCCGGTTTATATTATCGGGCGTTCGCTTGCAGGTGCCACCGGTGAAAACTGGCTCTGGTTTGCCTCCTATCTGGGTGCGCTCGGCTCGTTCTTCTCCGGCTCCAATACCGTATCAAACCTGACCTTCGGCGGTATTCAGCAATCTATTGCACAGACTACCGGGCTTAATGTGAATTTAACCCTGGCGCTGCAATCTGTCGGCGGGGCAATGGGCAACATGGTGTGCCTCAATAATATTATCGCGGTCTGCACTATCCTCGGGATCAGTAATGCAGAGGGATCGATTATCAAAAAGACGGTGGTTCCGATGTTTATTTACGGGCTGATTGCAGCCGGGATGGCGTTTATCCTGACGTTAGGTATACACGGCACTGATTTTGTTACAGACATTAAATAGGTATTAAAGATGATTATTTCTGCTTCAACGGATTACCGGGCAGCAGCCAA