Homologs in group_4153

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4153

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4153

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P94488 1.43e-12 73 31 2 166 3 ynaJ Uncharacterized symporter YnaJ Bacillus subtilis (strain 168)
P75683 5.17e-12 71 23 14 480 1 yagG Putative glycoside/cation symporter YagG Escherichia coli (strain K12)
P74168 2.25e-10 66 30 4 154 3 sll1374 Uncharacterized symporter sll1374 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P74168 6.64e-09 62 22 6 274 3 sll1374 Uncharacterized symporter sll1374 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P0CE45 2.07e-09 63 21 10 405 1 uidB Glucuronide carrier protein Escherichia coli (strain K12)
O07366 2.83e-09 63 23 13 458 1 melB Melibiose permease Klebsiella aerogenes
P0CE44 3.6e-09 62 21 10 405 1 uidB Glucuronide carrier protein homolog Escherichia coli (strain K12)
Q9L7R5 3.29e-08 59 22 13 483 3 yihP Putative 2,3-dihydroxypropane-1-sulfonate exporter Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P32136 7.54e-08 58 23 18 497 3 yihO Putative sulfoquinovose importer Escherichia coli (strain K12)
Q02581 2.17e-07 57 27 7 215 1 melB Melibiose permease Klebsiella pneumoniae
P96792 3.76e-07 56 21 16 496 1 xylP Isoprimeverose transporter Lactiplantibacillus pentosus
O34961 4.59e-07 55 21 13 466 2 yjmB Uncharacterized symporter YjmB Bacillus subtilis (strain 168)
P02921 1.12e-06 54 22 11 460 1 melB Melibiose permease Escherichia coli (strain K12)
P32137 1.77e-06 53 21 13 469 1 yihP Putative 2,3-dihydroxypropane-1-sulfonate exporter Escherichia coli (strain K12)
Q9L7R4 2.19e-06 53 22 18 505 3 yihO Putative sulfoquinovose importer Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P30878 4.17e-06 53 27 4 164 1 melB Melibiose permease Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
O33814 1.01e-05 51 24 6 225 3 lacP Lactose permease Staphylococcus xylosus
O34368 3.26e-05 50 27 3 146 3 gutA Probable glucitol transport protein GutA Bacillus subtilis (strain 168)
Q5U3U7 6.85e-05 49 26 3 146 2 mfsd2aa Sodium-dependent lysophosphatidylcholine symporter 1-A Danio rerio
Q0IHM1 6.92e-05 49 30 6 138 2 mfsd2a Sodium-dependent lysophosphatidylcholine symporter 1 Xenopus tropicalis
A4IH46 0.000167 47 28 4 130 2 mfsd2b Sphingosine-1-phosphate transporter MFSD2B Xenopus tropicalis
P31435 0.000245 47 21 10 439 1 yicJ Inner membrane symporter YicJ Escherichia coli (strain K12)
Q6DEJ6 0.000302 47 27 4 129 1 mfsd2ab Sodium-dependent lysophosphatidylcholine symporter 1-B Danio rerio
Q8NA29 0.000701 45 30 4 129 1 MFSD2A Sodium-dependent lysophosphatidylcholine symporter 1 Homo sapiens
Q9DA75 0.000733 45 26 3 135 1 Mfsd2a Sodium-dependent lysophosphatidylcholine symporter 1 Mus musculus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12540
Feature type CDS
Gene -
Product MFS transporter
Location 99393 - 100925 (strand: 1)
Length 1533 (nucleotides) / 510 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4153
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF13347 MFS/sugar transport protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2211 Carbohydrate transport and metabolism (G) G Na+/melibiose symporter or related transporter

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K16210 oligogalacturonide transporter - -

Protein Sequence

MYSSGPGSLAIRKKITPGRLMAYGGGNLLGSGVIAIAGAWLLYFYTTFCGLTLIEASIIFSVASVTDTISNPVMGYLTDHFGNTRLGRRFGRRRFFLLIGAPLMVFYPLLWIEGFGFWYYLFTYVAFELIYTSVMVPYETLASEMTDDFVIRTKLTGYKAIFGNIANFLAAFIPGQFILIYGKESSQPFLYTGICYGVILFIAISALYLATWEDKNSPKAGVPQGGSLWKTGTRLVRDIKSTFHLRVFRKHLGMYLFGYSAEGIFISLFTYYIIFALQFDPSILAGLNSLSSLLQLVSTIIFSTICVRYGFSKPYICALLFVIFAVCSHYLLHFFNLSPIVTVITIISITVIYGLGTGGVYYIPWALYTFLADVDEVFTGRRREGVYAGSMTFAGKISRSIIVFSVGATLTHFGFQPKSHIQPESAVNAISWIFFGGVTVLALIAIFFSCQMTLNRKTHQIVSDEIDRIRQGGKINDAGEEARKTIETLVGWPYEQCWGNNVICKKMQSP

Flanking regions ( +/- flanking 50bp)

ACGACTACCCAATCCCGGTGAATAAAAATACCGCGACTTTAGGACAGGAAATGTATTCATCCGGCCCGGGCTCTCTCGCCATAAGGAAAAAAATAACACCGGGCCGCCTGATGGCTTACGGCGGGGGAAATTTACTCGGCAGCGGCGTTATTGCCATTGCCGGTGCATGGTTGCTCTATTTCTATACCACATTTTGCGGGCTGACTCTGATAGAAGCCTCAATTATCTTTTCGGTTGCCAGTGTGACAGATACCATCAGTAACCCTGTGATGGGTTATCTGACCGACCACTTTGGTAACACCCGGTTGGGCAGACGCTTTGGCCGCCGCCGTTTCTTTTTGCTTATCGGTGCGCCGCTGATGGTCTTTTATCCCCTGCTGTGGATAGAAGGATTCGGTTTCTGGTATTACCTTTTTACGTATGTCGCATTTGAACTTATTTATACCTCGGTAATGGTGCCCTACGAAACGCTGGCCTCTGAAATGACCGATGATTTTGTTATCCGCACCAAACTTACCGGTTATAAAGCCATTTTTGGAAATATTGCCAATTTCCTGGCCGCCTTTATTCCGGGGCAATTTATTTTAATTTACGGTAAAGAGTCTTCACAACCTTTTCTTTATACCGGTATTTGCTATGGCGTTATTTTATTTATCGCAATCAGCGCACTCTATCTTGCCACATGGGAGGATAAAAACAGTCCGAAGGCGGGAGTTCCGCAAGGCGGCTCACTGTGGAAAACCGGTACAAGATTAGTTCGTGATATCAAATCTACATTCCATTTGCGCGTTTTCCGTAAGCATCTGGGAATGTATTTATTTGGCTACAGTGCTGAAGGTATATTTATTTCGTTATTTACATACTACATAATTTTCGCTTTACAATTTGACCCGTCAATTCTTGCCGGATTAAACAGCTTAAGTTCTCTTCTCCAACTCGTTTCAACCATTATATTCAGCACGATTTGTGTGAGATACGGATTCAGCAAACCCTATATCTGTGCACTACTCTTTGTTATTTTCGCGGTGTGCAGCCATTACCTGTTACATTTTTTTAATCTGTCCCCTATTGTCACTGTCATTACTATTATCAGCATTACCGTTATTTATGGTTTAGGCACCGGCGGTGTTTATTACATTCCATGGGCTTTATATACCTTTCTGGCGGATGTGGATGAAGTTTTTACCGGACGGCGCCGTGAGGGTGTTTATGCCGGTTCAATGACGTTCGCCGGTAAAATCTCACGCTCGATTATCGTATTTTCAGTGGGAGCGACTCTGACGCATTTTGGCTTTCAGCCTAAATCACATATACAGCCGGAAAGTGCGGTTAATGCTATCTCATGGATATTTTTTGGCGGGGTTACCGTTCTTGCTCTGATTGCCATTTTCTTCAGCTGCCAGATGACGCTTAACCGTAAAACGCATCAAATTGTGTCAGATGAAATTGATCGCATCAGGCAGGGAGGAAAAATCAACGATGCCGGAGAAGAGGCGCGCAAAACTATCGAAACGCTGGTGGGCTGGCCGTATGAGCAGTGCTGGGGGAATAATGTGATTTGCAAAAAAATGCAATCCCCCTGAGAGCGAATGTGTGGCAAAAATGGAGTCTGAATACGAATATCGATACCCGC