Homologs in group_3854

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS18010 PMI_RS18010 32.4 Proteus mirabilis HI4320 - cyanate transporter

Distribution of the homologs in the orthogroup group_3854

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3854

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76242 1.04e-124 369 52 3 390 1 nimT 2-nitroimidazole transporter Escherichia coli (strain K12)
P37482 7.49e-78 249 38 7 403 2 yycB Uncharacterized transporter YycB Bacillus subtilis (strain 168)
O33821 8.64e-24 100 54 0 96 3 None Putative anionic 4-hydroxy-benzoate permease (Fragment) Thauera aromatica
P17583 3.01e-21 97 27 6 374 3 cynX Cyanate transport protein CynX Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12530
Feature type CDS
Gene -
Product CynX/NimT family MFS transporter
Location 97324 - 98535 (strand: 1)
Length 1212 (nucleotides) / 403 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3854
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF07690 Major Facilitator Superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2807 Inorganic ion transport and metabolism (P) P Cyanate permease

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K25494 MFS transporter, CP family, 2-nitroimidazole transporter - -

Protein Sequence

MREIPIPQRKNLLLIVGILLIATNLRAPFTSLAPLLDMVRNSFDLTSAQAGLLQTLPLLAFAVFSPFAAGIARKFGMEKTLFISLIIIASGVCFRSFAGLSGLYGGTLLVGLGIAIGNVLLPGILKRDLPHKAASLTGLYALTMGLAAALGSATVIPLTHYFNTGWQNALLITLAFPIVALIVWIPQLSRRKIQNDMQGNTQGNTQNQPLPGVWGSGLAWQVSLYFGLNSFIYYIIVAWLPAILQNLGFSVAEAGSLHGVLQLSTAVPGFFIGPLIARLRNQCAPGILFALLGAVGLAGLLIIPSLSTLWVVLLGVSTGAGVILGLAFISLRSANSAQAAALSGMAQCVGYLLAAAGPPLVGLIHDKTGNWILPLAGCAVLALVLSILGYMAGRARQLSSGAG

Flanking regions ( +/- flanking 50bp)

AGCAGAAAACAGTTATAGTGTTTCTGACATTTGATACAGAGCTGCGAATAATGCGTGAAATACCGATACCTCAAAGAAAAAATTTGTTGTTAATCGTTGGAATACTTCTTATTGCAACGAATCTCCGGGCTCCTTTTACCAGCCTGGCACCGTTACTGGATATGGTCAGAAACAGTTTTGACTTAACATCGGCTCAGGCCGGTTTACTTCAGACACTGCCGTTACTGGCTTTTGCTGTTTTTTCACCGTTTGCCGCAGGAATTGCGCGCAAATTCGGAATGGAAAAAACATTATTTATTTCACTTATTATTATCGCATCAGGAGTCTGTTTCCGCTCATTTGCCGGTCTCAGTGGCTTATATGGCGGTACCTTACTGGTCGGTCTGGGAATAGCCATCGGGAACGTGCTGCTCCCGGGGATTTTAAAACGCGATTTACCCCATAAAGCGGCGAGCCTGACGGGGCTGTATGCGCTGACCATGGGTCTTGCTGCGGCGCTGGGATCGGCAACAGTCATTCCTTTAACGCACTATTTTAATACCGGCTGGCAGAATGCGTTATTGATAACTCTGGCATTCCCGATCGTTGCCCTGATTGTCTGGATCCCCCAATTATCACGCAGAAAAATTCAGAACGATATGCAGGGCAACACACAGGGCAATACACAGAATCAGCCGCTACCAGGCGTATGGGGATCAGGGCTGGCCTGGCAGGTATCCCTGTATTTCGGTCTTAACTCATTCATTTATTACATTATTGTCGCCTGGTTACCCGCTATTTTGCAAAATCTCGGGTTCAGCGTCGCCGAGGCCGGTTCGCTTCACGGCGTGTTGCAACTTTCAACCGCTGTGCCGGGCTTTTTCATCGGCCCTCTGATTGCCAGACTCCGCAACCAGTGTGCGCCCGGTATTCTGTTTGCCTTACTGGGCGCTGTTGGTCTGGCCGGGTTGCTGATTATTCCTTCACTTTCCACGCTCTGGGTCGTTCTGCTCGGCGTGAGTACCGGAGCAGGCGTGATCCTCGGACTCGCGTTTATCAGCCTGCGCTCAGCAAATTCTGCTCAGGCCGCCGCCCTGTCTGGTATGGCACAGTGTGTAGGCTATCTGCTGGCGGCGGCCGGACCTCCGCTTGTTGGTCTGATCCACGACAAAACAGGTAACTGGATACTTCCTCTCGCCGGCTGTGCTGTACTGGCTCTTGTTCTGTCAATACTGGGATATATGGCAGGGAGAGCACGTCAACTCTCTTCCGGTGCCGGGTAAAAAACGGTTATTCCACCACCAAAAACCTTACGGTCAGGAGATAAAAAATG