COG2807


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2807, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 9 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Cyanate permease
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG2807 is associated with 9 different proteins (see tab "Protein list" and "Profile")
The 9 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1775 FBDBKF_12950 89453 90718 1 cynX Cyanate permease Morganella morganii S1
1 group_1775 EHELCC_06265 259485 260750 1 cynX Cyanate permease Morganella morganii S2
2 group_1775 NLDBIP_06585 300550 301815 1 cynX Cyanate permease Morganella morganii S4
3 group_1775 LHKJJB_03465 278074 279339 1 cynX Cyanate permease Morganella morganii S3
4 group_1775 HKOGLL_06940 199938 201203 1 cynX Cyanate permease Morganella morganii S5
5 group_3854 F4V73_RS12530 97324 98535 1 CynX/NimT family MFS transporter Morganella psychrotolerans
6 group_1775 F4V73_RS16115 25091 26356 1 MFS transporter Morganella psychrotolerans
7 group_1775 PMI_RS10660 2343359 2344627 1 MFS transporter Proteus mirabilis HI4320
8 group_3854 PMI_RS18010 3956830 3958026 -1 cyanate transporter Proteus mirabilis HI4320