Homologs in group_392

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15020 FBDBKF_15020 84.0 Morganella morganii S1 ceuA ABC-type enterochelin transport system, periplasmic component
EHELCC_11225 EHELCC_11225 84.0 Morganella morganii S2 ceuA ABC-type enterochelin transport system, periplasmic component
NLDBIP_11570 NLDBIP_11570 84.0 Morganella morganii S4 ceuA ABC-type enterochelin transport system, periplasmic component
LHKJJB_11430 LHKJJB_11430 84.0 Morganella morganii S3 ceuA ABC-type enterochelin transport system, periplasmic component
HKOGLL_10040 HKOGLL_10040 84.0 Morganella morganii S5 ceuA ABC-type enterochelin transport system, periplasmic component
PMI_RS01580 PMI_RS01580 56.3 Proteus mirabilis HI4320 - siderophore ABC transporter substrate-binding protein
PMI_RS14620 PMI_RS14620 28.1 Proteus mirabilis HI4320 - siderophore ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_392

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_392

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P94421 9.85e-60 196 36 4 321 1 yclQ Petrobactin-binding protein YclQ Bacillus subtilis (strain 168)
P11460 1.95e-29 117 25 7 277 1 fatB Ferric-anguibactin-binding protein FatB Vibrio anguillarum (strain ATCC 68554 / 775)
C0SP94 6.67e-14 74 25 13 344 1 yhfQ Putative ABC transporter substrate-binding lipoprotein YhfQ Bacillus subtilis (strain 168)
Q81L65 3.16e-11 66 26 5 202 1 fpuA Petrobactin-binding protein FpuA Bacillus anthracis
Q845T3 1.79e-10 64 26 4 170 1 vatD Ferric aerobactin-binding protein VatD Vibrio vulnificus
P37580 8e-08 56 25 10 281 1 fhuD Iron(3+)-hydroxamate-binding protein FhuD Bacillus subtilis (strain 168)
O34348 9.75e-07 53 33 3 106 2 yfmC Fe(3+)-citrate-binding protein YfmC Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12430
Feature type CDS
Gene -
Product ABC transporter substrate-binding protein
Location 69743 - 70699 (strand: -1)
Length 957 (nucleotides) / 318 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_392
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF01497 Periplasmic binding protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4607 Inorganic ion transport and metabolism (P) P ABC-type enterochelin transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K25282 iron-siderophore transport system substrate-binding protein - -

Protein Sequence

MKKIIPLVLIPFLSFVSASVQAETSPQYTPNHITAVAGKAPLLTIEHQSGKTDVVRKPARVVLFDFGVYDTMKQLGLADNVTGLPLSNLPEYLKGQVNSNVVDAGGMKTPDLAKIAELKPDLIVITGRQGKSFDELSKIAPTVNLGTGGDDYLKAARANIALIGQLYDIDKKTAEALTTLNKTIVQAQEKAAKSGKKVLVMLHNDGKLFPNKQPVVYQVVKAAGVELPVDANAEKGKRMLLTPDVVAELNPDVILVIDRSAAIGAGAWDKAAFETDGVKKTNAYKNGKIIVLQPDLWYLSGGGLDSLNRQVQAVAGAL

Flanking regions ( +/- flanking 50bp)

TTCTCCCTAGAATGAATTGCGACGTTAAACGCATTTAATCAGGCAGGAACATGAAAAAAATCATTCCGTTAGTGTTAATCCCTTTTTTAAGTTTTGTCAGCGCATCCGTGCAGGCAGAGACTTCGCCGCAGTATACGCCTAATCACATTACCGCTGTTGCGGGCAAAGCGCCGTTACTGACCATTGAACATCAGTCAGGAAAAACAGACGTTGTACGCAAACCCGCCCGCGTGGTGCTGTTTGATTTCGGTGTGTATGACACCATGAAACAGCTTGGTCTGGCGGACAATGTCACCGGGCTGCCGCTGAGTAATCTGCCGGAGTATCTGAAAGGGCAGGTAAACAGTAATGTGGTTGATGCGGGCGGAATGAAAACGCCGGATCTTGCTAAAATTGCAGAACTGAAGCCGGACCTGATTGTGATAACCGGGCGTCAGGGAAAATCGTTTGATGAGCTGAGCAAAATCGCACCGACAGTAAACCTGGGAACCGGTGGTGATGATTATCTGAAAGCAGCGCGAGCTAATATTGCGCTGATCGGTCAGCTTTATGATATTGATAAAAAAACGGCTGAAGCACTGACAACACTGAATAAAACTATTGTTCAGGCTCAGGAAAAAGCGGCGAAATCCGGTAAAAAAGTGCTGGTCATGCTGCACAATGACGGAAAATTATTCCCGAATAAACAACCTGTTGTCTACCAGGTTGTTAAAGCCGCAGGCGTAGAACTCCCGGTTGATGCAAATGCAGAAAAAGGTAAACGAATGCTGCTGACGCCGGACGTGGTGGCAGAACTGAATCCGGATGTGATCCTGGTGATTGACCGTAGTGCGGCAATTGGTGCAGGGGCGTGGGACAAAGCGGCATTTGAGACAGATGGCGTGAAAAAAACCAACGCGTATAAAAACGGAAAAATTATCGTGTTACAACCGGATCTCTGGTATCTCTCCGGTGGCGGGCTGGACAGTCTGAACCGTCAGGTGCAGGCAGTGGCAGGCGCACTGTAATACCCTTATTCATTCAAACTGCAGGTTCGTTGGCCGCACTCAGCCAGCCG