Homologs in group_682

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02605 FBDBKF_02605 30.4 Morganella morganii S1 acrB Multidrug efflux pump subunit AcrB
EHELCC_03075 EHELCC_03075 30.4 Morganella morganii S2 acrB Multidrug efflux pump subunit AcrB
NLDBIP_00385 NLDBIP_00385 30.4 Morganella morganii S4 acrB Multidrug efflux pump subunit AcrB
LHKJJB_01650 LHKJJB_01650 30.4 Morganella morganii S3 acrB Multidrug efflux pump subunit AcrB
HKOGLL_01690 HKOGLL_01690 30.4 Morganella morganii S5 acrB Multidrug efflux pump subunit AcrB
F4V73_RS05045 F4V73_RS05045 29.4 Morganella psychrotolerans - efflux RND transporter permease subunit

Distribution of the homologs in the orthogroup group_682

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_682

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q2T2R2 0.000425 47 28 3 151 1 hpnN Hopanoid transporter HpnN Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11990
Feature type CDS
Gene -
Product MMPL family transporter
Location 551477 - 553690 (strand: 1)
Length 2214 (nucleotides) / 737 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_682
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF03176 MMPL family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4258 General function prediction only (R) R Predicted exporter

Protein Sequence

MALLPVQVISSASPALSEGFLARLDKQLVWLVSPAAGAPQVQDNAASSWLNQLKKQPFMASVNGPVTAEQQKSWGEFYYRHRNALVDEQTRARLQNGEQQADWITGQLFSAFSGLSSVELQHDPMLLVRGSQLALQQAGSKFSLRNGWLTVSDAEGRTWYMIHGELNDGAGELKKSHETVSTLEAMQQDWLKANPGGQIKVRGSLYYSDYASQQAQSDMSRLGTVTVLGVFLLIVAVFRSIRPLFLCLFSVLTGSLCGVVATLLVYGEIHLLTLVMSMSIIGISVDYAIYYLTERMVYGQQSSPRESLLKVRPALILALGTTVSAYLIMMLAPFPGIRQLALFAAAGLTGACLTVITLFPVLVRGLPVRPVPFSMLLLRWLAVWRHNKWVRTGLPLLAVLFSLAGISQLRINDDIAALQALPQTLAEQDRDIGEMTGQRSDQTWFLVTGASPEQAFQRLENMLQPLDALRAKGVFSAYQRVPFYSQQRQSQNAKLVRDAAPGVLTRLQAIGTEDPVIDTSAMSVTPEEWLASPVSQGWRLMLLTLPGTGETGILLPVTGVKDTGALAKLADDHEGASWIARKAQFDELFGFYRLVLSILLGVAFCVVVVTYLFREGIKRGLVCVIPTTLSLLVALGALGISGMPLNLFSLLALVLVLGIGINYSIFFSNPKGTALTSLLAVTVALCTTLLTLGMLVMSATQAIQGFGLALCAGIFSAWLFSPLTMGTTKQRHKNKVR

Flanking regions ( +/- flanking 50bp)

TGGCGCTTTTTATCTGGCTGCTGCCCCAGGCGCGCATTGCATCCAGTGTGATGGCGCTGCTGCCGGTACAGGTGATAAGCAGTGCGTCTCCGGCGCTGTCTGAGGGGTTTCTTGCCAGGCTTGATAAACAGCTGGTCTGGCTGGTCAGCCCGGCGGCGGGGGCGCCGCAGGTGCAGGATAATGCCGCCTCTTCTTGGCTTAACCAACTGAAAAAACAGCCCTTTATGGCATCAGTCAACGGGCCGGTAACGGCGGAGCAGCAGAAATCATGGGGTGAATTTTACTATCGCCACCGTAACGCTCTGGTTGATGAGCAAACCCGCGCCCGGCTACAGAACGGGGAGCAGCAGGCGGACTGGATCACCGGACAACTGTTTTCTGCTTTTTCAGGGCTGAGCAGCGTTGAGCTGCAACATGACCCGATGCTGCTGGTGCGCGGATCACAACTGGCGTTACAGCAGGCGGGCAGTAAATTTTCACTGCGTAACGGCTGGCTGACCGTATCCGATGCCGAGGGGCGGACGTGGTATATGATCCACGGAGAACTGAATGACGGCGCAGGTGAGCTGAAAAAATCACATGAGACGGTCAGTACGCTCGAAGCGATGCAACAAGACTGGCTGAAAGCCAATCCCGGCGGGCAGATCAAAGTACGCGGCAGCTTGTATTACAGTGATTACGCCAGCCAACAGGCTCAGTCAGACATGAGCCGTCTGGGAACGGTAACCGTTCTGGGTGTCTTTTTGCTGATTGTCGCGGTTTTCCGCTCAATAAGACCGCTGTTCCTCTGCCTGTTTTCTGTGCTCACCGGCAGTTTGTGCGGGGTGGTGGCAACACTGCTGGTTTATGGCGAAATCCATCTGCTGACCCTGGTGATGAGTATGAGTATTATCGGGATTTCTGTGGATTATGCGATTTACTATCTGACAGAACGGATGGTTTACGGGCAGCAGAGCAGCCCGCGCGAAAGTCTTTTAAAAGTACGCCCTGCGCTTATTCTGGCGCTGGGTACGACCGTTTCCGCGTATCTGATTATGATGCTGGCACCTTTCCCCGGTATCCGCCAACTGGCGCTGTTTGCCGCTGCCGGTCTGACCGGCGCGTGCCTGACGGTTATCACGCTTTTCCCGGTACTGGTGCGCGGATTACCTGTCCGCCCGGTTCCTTTCAGTATGTTGCTGCTGCGCTGGCTGGCTGTCTGGCGGCATAATAAATGGGTCAGAACCGGGCTGCCTCTGCTGGCTGTACTATTCTCGCTGGCGGGGATCAGTCAGCTACGGATTAATGATGATATCGCGGCATTGCAGGCACTGCCTCAGACCCTGGCAGAGCAGGATCGCGATATCGGCGAAATGACCGGTCAGCGCAGTGACCAGACCTGGTTTCTGGTAACCGGTGCATCGCCGGAGCAGGCATTTCAGCGCCTGGAAAATATGTTACAGCCACTGGATGCCCTGCGGGCAAAAGGCGTTTTCAGTGCGTATCAGCGCGTGCCGTTTTATTCACAGCAACGTCAAAGTCAGAATGCAAAATTAGTCCGCGATGCCGCACCCGGCGTACTTACCCGTTTACAGGCTATCGGCACGGAAGATCCGGTTATTGACACGTCCGCTATGTCAGTTACACCGGAAGAATGGCTGGCATCACCTGTCAGTCAGGGCTGGCGTCTGATGTTACTCACGCTGCCCGGAACCGGTGAAACCGGGATATTACTGCCGGTAACCGGCGTGAAAGATACCGGGGCGCTGGCAAAACTGGCTGATGATCATGAGGGCGCAAGCTGGATCGCCCGTAAAGCGCAGTTTGATGAGCTTTTCGGTTTCTACCGGCTGGTTCTGAGTATTCTGCTGGGCGTGGCATTTTGTGTCGTGGTGGTGACTTATCTTTTCCGCGAAGGGATAAAAAGAGGGCTGGTGTGTGTTATCCCGACCACGCTGTCACTGCTGGTTGCGCTGGGCGCGCTCGGCATAAGCGGAATGCCGCTCAATCTCTTTTCTCTGTTGGCGCTGGTGCTGGTACTGGGCATAGGGATTAATTACAGCATCTTTTTCAGTAACCCGAAAGGCACCGCACTGACATCACTGCTGGCGGTAACTGTTGCACTCTGTACCACATTACTGACCCTGGGAATGCTGGTGATGAGTGCCACCCAGGCAATACAGGGATTCGGACTGGCGCTGTGCGCCGGTATCTTCAGTGCATGGTTGTTCTCCCCGCTGACAATGGGCACAACCAAACAACGACATAAAAACAAGGTACGATAATGCGTTCAGTCTGTTTTCTCTTTTTATTTATCTTAACCGGATGCGTAACA