Homologs in group_247

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03035 FBDBKF_03035 57.9 Morganella morganii S1 - Glycosyltransferase family 25 (LPS biosynthesis protein)
EHELCC_07500 EHELCC_07500 57.9 Morganella morganii S2 - Glycosyltransferase family 25 (LPS biosynthesis protein)
NLDBIP_07825 NLDBIP_07825 57.9 Morganella morganii S4 - Glycosyltransferase family 25 (LPS biosynthesis protein)
LHKJJB_07360 LHKJJB_07360 57.9 Morganella morganii S3 - Glycosyltransferase family 25 (LPS biosynthesis protein)
HKOGLL_03570 HKOGLL_03570 57.9 Morganella morganii S5 - Glycosyltransferase family 25 (LPS biosynthesis protein)
F4V73_RS03020 F4V73_RS03020 63.6 Morganella psychrotolerans - glycosyltransferase family 25 protein
F4V73_RS09435 F4V73_RS09435 40.1 Morganella psychrotolerans - glycosyltransferase family 25 protein

Distribution of the homologs in the orthogroup group_247

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_247

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11880
Feature type CDS
Gene -
Product glycosyltransferase
Location 530509 - 531219 (strand: 1)
Length 711 (nucleotides) / 236 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_247
Orthogroup size 8
N. genomes 6

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Genomic region

Domains

PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3306 Cell wall/membrane/envelope biogenesis (M) M Glycosyltransferase involved in LPS biosynthesis, GR25 family

Protein Sequence

MDLNRFMSDESFTLDHDLFEKIIYINLKNRTDRNKNILAKLTEMEIPYDKIIRFEAIETDLGYIGCAQSHAAVMNMVIENSWGTVLVIEDDTDFYTDPEHIKQANTFLSRLKEKNWDVALLGGNYFCVYYHEPECCLFNLMMSFCANAYIVNQHYADKMLSIFNESVYLISETGVPDESKGIDAHWCNFMKDDNWYGLYPCIAYQAKGISNIRKGYTDYEYLFNKPLSELEFHDKE

Flanking regions ( +/- flanking 50bp)

GTTTGAATGAACAAGGGTATAAATTATATATCCCCGATGCAGGAGGCAATGTGGATCTCAACCGGTTTATGTCAGATGAAAGTTTTACGTTAGATCATGATCTTTTTGAAAAGATAATTTATATAAATTTAAAAAACAGAACAGATCGTAATAAAAACATTCTGGCTAAATTAACTGAAATGGAGATCCCGTATGACAAAATTATTCGCTTTGAGGCAATAGAAACCGATTTGGGGTATATCGGTTGTGCGCAGTCTCATGCAGCAGTCATGAATATGGTGATTGAAAATAGCTGGGGAACGGTATTAGTTATTGAAGATGATACGGATTTTTATACCGACCCGGAGCATATCAAACAAGCTAATACATTTTTATCCCGCCTGAAAGAAAAAAACTGGGATGTTGCCCTCCTGGGCGGAAATTATTTTTGTGTTTATTATCATGAGCCTGAGTGTTGTCTTTTCAACCTTATGATGTCGTTCTGTGCTAATGCCTATATTGTGAATCAGCATTATGCTGACAAGATGCTGTCGATATTTAATGAATCTGTTTATCTTATCAGTGAAACGGGTGTGCCTGATGAATCAAAAGGAATTGATGCACACTGGTGTAATTTTATGAAAGATGATAACTGGTATGGTTTATATCCCTGTATTGCTTATCAGGCAAAAGGAATAAGTAATATAAGGAAAGGATATACTGACTATGAGTATTTGTTTAATAAACCATTATCAGAACTTGAGTTTCATGATAAAGAATAACTTACAGCGTTACTCATACTAAAAAAGTATCCGCCATCAGGCGGATACTT