Homologs in group_234

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03035 FBDBKF_03035 46.8 Morganella morganii S1 - Glycosyltransferase family 25 (LPS biosynthesis protein)
EHELCC_07500 EHELCC_07500 46.8 Morganella morganii S2 - Glycosyltransferase family 25 (LPS biosynthesis protein)
NLDBIP_07825 NLDBIP_07825 46.8 Morganella morganii S4 - Glycosyltransferase family 25 (LPS biosynthesis protein)
LHKJJB_07360 LHKJJB_07360 46.8 Morganella morganii S3 - Glycosyltransferase family 25 (LPS biosynthesis protein)
HKOGLL_03570 HKOGLL_03570 46.8 Morganella morganii S5 - Glycosyltransferase family 25 (LPS biosynthesis protein)
F4V73_RS09435 F4V73_RS09435 39.2 Morganella psychrotolerans - glycosyltransferase family 25 protein
F4V73_RS11880 F4V73_RS11880 63.6 Morganella psychrotolerans - glycosyltransferase

Distribution of the homologs in the orthogroup group_234

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_234

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A5PK45 0.000187 45 31 3 116 2 COLGALT1 Procollagen galactosyltransferase 1 Bos taurus
Q7Q021 0.000477 44 28 10 196 3 AGAP012208 Glycosyltransferase 25 family member Anopheles gambiae
Q5T4B2 0.000532 44 29 2 101 1 CERCAM Inactive glycosyltransferase 25 family member 3 Homo sapiens
A3KGW5 0.001 43 24 4 149 3 Cercam Inactive glycosyltransferase 25 family member 3 Mus musculus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03020
Feature type CDS
Gene -
Product glycosyltransferase family 25 protein
Location 644652 - 645413 (strand: 1)
Length 762 (nucleotides) / 253 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_234
Orthogroup size 8
N. genomes 6

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Genomic region

Domains

PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3306 Cell wall/membrane/envelope biogenesis (M) M Glycosyltransferase involved in LPS biosynthesis, GR25 family

Protein Sequence

MDLSMFMSDENFSLDHQYFDKVIYINLKSRDDRNEHILSVLKKAEIPDAKIIRFDAIEDNPGFIGCARSHAAVMDMVIKQNLGTVLVLEDDADFYMDLTHIRQANKFLACLNERSWDVALLGGNYYLAYTQEPDNYLLKLMLSFCAHAYIVNQHYAETVLRIFNESIALMNETSVPNESKGIDAHWCNYMEKDNWYGLYPCIARQRDDYSNIRGGYIHYGDLFNKSPDDMCIETIFLPEGNKASIFDDEVQIN

Flanking regions ( +/- flanking 50bp)

TTGTTTATATAAGCTTAATGAATAAGTAATGGACGCAGGGTGTTAATAATATGGATCTTTCTATGTTTATGTCTGATGAGAACTTTTCATTAGACCATCAGTATTTTGATAAGGTTATTTATATTAATCTTAAATCGCGGGATGACCGCAATGAACATATTTTAAGCGTATTAAAAAAAGCAGAAATACCGGATGCTAAAATAATCCGGTTTGATGCGATTGAAGATAACCCGGGGTTTATCGGCTGTGCCCGTTCACATGCGGCCGTGATGGATATGGTTATCAAACAAAATCTGGGAACAGTATTAGTTCTTGAAGATGATGCCGATTTTTATATGGATTTAACGCATATCCGTCAGGCGAATAAATTTTTAGCCTGCCTGAATGAAAGGTCATGGGATGTGGCATTATTAGGCGGGAATTATTATCTTGCCTATACACAGGAGCCTGATAATTATCTGTTGAAACTCATGTTATCTTTTTGTGCTCATGCTTATATAGTAAACCAGCATTATGCAGAAACAGTTCTGAGAATATTCAATGAATCAATTGCTCTGATGAATGAAACAAGCGTACCCAATGAATCAAAGGGTATAGATGCGCACTGGTGTAATTATATGGAAAAAGATAACTGGTACGGATTATATCCTTGTATTGCACGGCAGCGTGATGACTACAGTAATATACGTGGCGGGTATATTCATTACGGGGATCTGTTTAATAAATCACCGGATGATATGTGTATAGAGACGATATTTCTGCCGGAAGGGAATAAGGCGAGTATTTTTGATGATGAAGTTCAGATAAATTGATTGAAATGAAGGTTTTTATGTTAATGGAAAGATAAAACAGGGATATTTTA