Homologs in group_730

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03220 FBDBKF_03220 85.0 Morganella morganii S1 eCM27 Ca2+/Na+ antiporter
EHELCC_07315 EHELCC_07315 85.0 Morganella morganii S2 eCM27 Ca2+/Na+ antiporter
NLDBIP_07640 NLDBIP_07640 85.0 Morganella morganii S4 eCM27 Ca2+/Na+ antiporter
LHKJJB_07175 LHKJJB_07175 85.0 Morganella morganii S3 eCM27 Ca2+/Na+ antiporter
HKOGLL_03755 HKOGLL_03755 85.0 Morganella morganii S5 eCM27 Ca2+/Na+ antiporter
PMI_RS18180 PMI_RS18180 49.7 Proteus mirabilis HI4320 - calcium/sodium antiporter

Distribution of the homologs in the orthogroup group_730

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_730

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45394 3.98e-75 236 47 0 301 1 yrbG Inner membrane protein YrbG Escherichia coli (strain K12)
Q0ZAI3 3.11e-59 195 40 3 319 3 caxA Putative antiporter CaxA Alkalimonas amylolytica
Q8TPA6 1.43e-35 134 29 6 336 1 maX1 Sodium/calcium exchanger MaX1 Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
Q8TPA6 2.39e-15 79 36 2 141 1 maX1 Sodium/calcium exchanger MaX1 Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
Q57556 5.27e-26 108 31 6 303 1 MJ0091 Uncharacterized membrane protein MJ0091 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q57556 9.52e-06 50 34 1 104 1 MJ0091 Uncharacterized membrane protein MJ0091 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q9IAL7 8.48e-09 60 38 4 118 2 SLC24A2 Sodium/potassium/calcium exchanger 2 Gallus gallus
Q9IAL7 0.000113 47 26 3 128 2 SLC24A2 Sodium/potassium/calcium exchanger 2 Gallus gallus
O54701 2.15e-08 58 38 4 118 1 Slc24a2 Sodium/potassium/calcium exchanger 2 Rattus norvegicus
O54701 0.000633 45 25 2 124 1 Slc24a2 Sodium/potassium/calcium exchanger 2 Rattus norvegicus
Q8BUN9 2.8e-08 58 38 4 118 1 Slc24a2 Sodium/potassium/calcium exchanger 2 Mus musculus
Q8BUN9 9.8e-05 47 26 2 124 1 Slc24a2 Sodium/potassium/calcium exchanger 2 Mus musculus
Q91WD8 4.61e-08 58 48 0 58 2 Slc24a1 Sodium/potassium/calcium exchanger 1 Mus musculus
Q91WD8 0.000558 45 29 2 94 2 Slc24a1 Sodium/potassium/calcium exchanger 1 Mus musculus
Q9QZM6 4.65e-08 58 48 0 58 2 Slc24a1 Sodium/potassium/calcium exchanger 1 Rattus norvegicus
O60721 1.19e-07 57 48 0 58 1 SLC24A1 Sodium/potassium/calcium exchanger 1 Homo sapiens
Q9UI40 1.33e-07 56 36 3 119 1 SLC24A2 Sodium/potassium/calcium exchanger 2 Homo sapiens
Q9IAL8 1.2e-06 53 48 0 58 2 SLC24A1 Sodium/potassium/calcium exchanger 1 Gallus gallus
Q28139 4.89e-06 52 48 0 58 1 SLC24A1 Sodium/potassium/calcium exchanger 1 Bos taurus
Q8C261 1.58e-05 50 30 4 110 2 Slc24a5 Sodium/potassium/calcium exchanger 5 Mus musculus
Q9U6A0 9.39e-05 47 42 0 59 2 Nckx30C Sodium/potassium/calcium exchanger Nckx30C Drosophila melanogaster
Q75XW3 0.000126 47 24 9 311 1 None Ca(2+)/H(+) antiporter Aphanothece halophytica
Q49SH1 0.000129 47 36 1 55 2 slc24a5 Sodium/potassium/calcium exchanger 5 Danio rerio
Q71RS6 0.000374 45 40 1 54 1 SLC24A5 Sodium/potassium/calcium exchanger 5 Homo sapiens
Q8CGQ8 0.000398 45 43 0 55 1 Slc24a4 Sodium/potassium/calcium exchanger 4 Mus musculus
Q9EPQ0 0.000424 45 37 0 69 1 Slc24a3 Sodium/potassium/calcium exchanger 3 (Fragment) Rattus norvegicus
Q9HC58 0.00048 45 37 0 69 1 SLC24A3 Sodium/potassium/calcium exchanger 3 Homo sapiens
Q99PD7 0.000485 45 37 0 69 1 Slc24a3 Sodium/potassium/calcium exchanger 3 Mus musculus
Q8NFF2 0.000528 45 41 0 55 1 SLC24A4 Sodium/potassium/calcium exchanger 4 Homo sapiens
Q9FKP1 0.001 44 26 6 171 2 CCX1 Cation/calcium exchanger 1 Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11700
Feature type CDS
Gene -
Product calcium/sodium antiporter
Location 489479 - 490441 (strand: -1)
Length 963 (nucleotides) / 320 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_730
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF01699 Sodium/calcium exchanger protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0530 Inorganic ion transport and metabolism (P) P Ca2+/Na+ antiporter

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07301 cation:H+ antiporter - -

Protein Sequence

MLLTCILLLIGLILLVYASDRIVYSAAIFSRALGISPFIIGIVVAGLGTSLPELIISAGAVLEGQPALALGTIIGSNITNLLLIAGLAALIRPMSVQSAILRRELPIMLAVMALFGLFIWSGGITRIQGGFLLLAGLASLWLVVKIASIARRDQYDGFTTERNHELPQENSLPIALLWLVAGLLILPVSVRIVIDNAVAFTRYAGISGRITGLTILAIGTSLPELCTTIAAAVKGEKDIALGNLIGSTLFNITIVAGIPAILAATPMTAHSFVSDFWVMIAASILFVLFSAGRKQRLNRLKGIILLGGFIAWLTSLFMGY

Flanking regions ( +/- flanking 50bp)

AACACCCTGCACTTTATCATAATCCACTATTTCTGACCCGGAGGAGAGCTATGCTACTCACTTGCATTCTTTTACTTATCGGGTTGATATTGCTTGTTTATGCCTCTGACCGGATTGTTTACAGCGCGGCGATTTTTTCCCGTGCGCTTGGTATTTCCCCGTTTATTATTGGTATTGTTGTTGCTGGTCTGGGTACTTCTTTACCTGAACTGATTATTTCTGCGGGCGCGGTACTTGAGGGGCAACCTGCTCTGGCTCTCGGCACCATTATCGGCTCCAACATTACCAATTTACTGCTTATTGCCGGATTAGCGGCACTGATCCGCCCTATGAGTGTCCAGTCGGCTATTTTGCGCCGTGAACTGCCGATTATGCTGGCGGTGATGGCGCTTTTCGGGCTGTTTATCTGGTCGGGCGGCATTACCCGGATTCAGGGCGGATTTCTGCTGCTTGCGGGGCTGGCAAGCCTCTGGCTGGTGGTAAAAATTGCCTCGATTGCCCGGCGTGACCAATATGACGGCTTCACAACTGAACGAAACCATGAACTACCGCAGGAAAATAGTCTGCCGATTGCTTTATTGTGGCTGGTCGCCGGATTACTGATTTTGCCGGTATCTGTGCGGATTGTGATTGATAATGCGGTCGCCTTTACCCGTTATGCGGGCATCAGCGGGCGGATAACCGGGCTGACTATCCTGGCAATCGGTACCAGCCTGCCGGAGCTTTGCACCACAATTGCTGCTGCGGTAAAAGGGGAAAAGGATATTGCTCTCGGTAATCTTATCGGCTCAACATTATTTAATATCACAATCGTTGCCGGTATCCCTGCCATATTAGCTGCCACTCCGATGACCGCGCACAGTTTTGTATCTGATTTTTGGGTTATGATAGCGGCCAGTATTCTTTTTGTTCTTTTTTCGGCAGGCCGGAAACAGCGCCTGAACCGGCTGAAAGGGATTATTCTGCTCGGCGGATTTATTGCCTGGCTGACAAGCCTCTTTATGGGCTATTAAGCTGTACAGCTTTAGCCATTAACACACTGAAAGTGAGAAAAACCTGATGT