COG0530


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0530, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Ca2+/Na+ antiporter
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG0530 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_730 FBDBKF_03220 46203 47162 1 eCM27 Ca2+/Na+ antiporter Morganella morganii S1
1 group_730 EHELCC_07315 199941 200900 -1 eCM27 Ca2+/Na+ antiporter Morganella morganii S2
2 group_730 NLDBIP_07640 199814 200773 -1 eCM27 Ca2+/Na+ antiporter Morganella morganii S4
3 group_730 LHKJJB_07175 163560 164519 -1 eCM27 Ca2+/Na+ antiporter Morganella morganii S3
4 group_730 HKOGLL_03755 68868 69827 1 eCM27 Ca2+/Na+ antiporter Morganella morganii S5
5 group_730 F4V73_RS11700 489479 490441 -1 calcium/sodium antiporter Morganella psychrotolerans
6 group_730 PMI_RS18180 3990240 3991220 -1 calcium/sodium antiporter Proteus mirabilis HI4320