Homologs in group_757

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03380 FBDBKF_03380 99.0 Morganella morganii S1 fis DNA-binding transcriptional regulator Fis
EHELCC_07155 EHELCC_07155 99.0 Morganella morganii S2 fis DNA-binding transcriptional regulator Fis
NLDBIP_07480 NLDBIP_07480 99.0 Morganella morganii S4 fis DNA-binding transcriptional regulator Fis
LHKJJB_07015 LHKJJB_07015 99.0 Morganella morganii S3 fis DNA-binding transcriptional regulator Fis
HKOGLL_03915 HKOGLL_03915 99.0 Morganella morganii S5 fis DNA-binding transcriptional regulator Fis
PMI_RS18020 PMI_RS18020 98.0 Proteus mirabilis HI4320 fis DNA-binding transcriptional regulator Fis

Distribution of the homologs in the orthogroup group_757

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_757

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7N015 8.52e-66 196 97 0 98 3 fis DNA-binding protein Fis Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
B4EX21 9.01e-66 196 97 0 98 3 fis DNA-binding protein Fis Proteus mirabilis (strain HI4320)
P0CW84 9.01e-66 196 97 0 98 3 fis DNA-binding protein Fis Proteus hauseri
Q3YWY8 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Shigella sonnei (strain Ss046)
P0A6R8 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Shigella flexneri
Q0T029 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Shigella flexneri serotype 5b (strain 8401)
Q32B77 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Shigella dysenteriae serotype 1 (strain Sd197)
Q31W07 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Shigella boydii serotype 4 (strain Sb227)
B2U2N7 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
A8GK78 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Serratia proteamaculans (strain 568)
P0A6R9 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Serratia marcescens
P0A6R6 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A6R7 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Salmonella typhi
B4TX93 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Salmonella schwarzengrund (strain CVM19633)
B5BGT9 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Salmonella paratyphi A (strain AKU_12601)
C0PZT1 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Salmonella paratyphi C (strain RKS4594)
A9N889 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJW3 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4SUP1 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Salmonella newport (strain SL254)
B4TJV9 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Salmonella heidelberg (strain SL476)
B5REY3 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5R1C8 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Salmonella enteritidis PT4 (strain P125109)
B5FIW4 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Salmonella dublin (strain CT_02021853)
Q57J83 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Salmonella choleraesuis (strain SC-B67)
A9MN98 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B5F7P5 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Salmonella agona (strain SL483)
A6TES8 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5XND7 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Klebsiella pneumoniae (strain 342)
B7LRN6 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B2VL73 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
C5BEX0 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Edwardsiella ictaluri (strain 93-146)
Q1R667 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli (strain UTI89 / UPEC)
B1LGM6 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli (strain SMS-3-5 / SECEC)
B6I1Y1 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli (strain SE11)
B7NDN9 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P0A6R3 2.5e-65 194 96 0 98 1 fis DNA-binding protein Fis Escherichia coli (strain K12)
B1IQ31 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
P0A6R4 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TCJ5 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AGG1 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli O1:K1 / APEC
A8A573 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli O9:H4 (strain HS)
B1XHN0 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli (strain K12 / DH10B)
C4ZSZ7 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli (strain K12 / MC4100 / BW2952)
B7M0X3 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli O8 (strain IAI1)
B7N0Q5 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli O81 (strain ED1a)
B7NLI7 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5YSY6 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli O157:H7 (strain EC4115 / EHEC)
P0A6R5 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli O157:H7
B7LHW8 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli (strain 55989 / EAEC)
B7MC31 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli O45:K1 (strain S88 / ExPEC)
B7UJZ2 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A7ZSF6 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Escherichia coli O139:H28 (strain E24377A / ETEC)
A7MJA9 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Cronobacter sakazakii (strain ATCC BAA-894)
A8AQG0 2.5e-65 194 96 0 98 3 fis DNA-binding protein Fis Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q2NWQ0 2.73e-65 194 96 0 98 3 fis DNA-binding protein Fis Sodalis glossinidius (strain morsitans)
B1JKF0 3.25e-65 194 96 0 98 3 fis DNA-binding protein Fis Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q665E1 3.25e-65 194 96 0 98 3 fis DNA-binding protein Fis Yersinia pseudotuberculosis serotype I (strain IP32953)
A4THB7 3.25e-65 194 96 0 98 3 fis DNA-binding protein Fis Yersinia pestis (strain Pestoides F)
Q1CDT5 3.25e-65 194 96 0 98 3 fis DNA-binding protein Fis Yersinia pestis bv. Antiqua (strain Nepal516)
A9R1Z3 3.25e-65 194 96 0 98 3 fis DNA-binding protein Fis Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAX8 3.25e-65 194 96 0 98 3 fis DNA-binding protein Fis Yersinia pestis
B2K469 3.25e-65 194 96 0 98 3 fis DNA-binding protein Fis Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1C1P4 3.25e-65 194 96 0 98 3 fis DNA-binding protein Fis Yersinia pestis bv. Antiqua (strain Antiqua)
A7FDQ0 3.25e-65 194 96 0 98 3 fis DNA-binding protein Fis Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A1JRL7 3.25e-65 194 96 0 98 3 fis DNA-binding protein Fis Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A4WF77 9.65e-65 193 95 0 98 3 fis DNA-binding protein Fis Enterobacter sp. (strain 638)
C6DIJ6 1.44e-63 190 94 0 98 3 fis DNA-binding protein Fis Pectobacterium carotovorum subsp. carotovorum (strain PC1)
O52540 1.44e-63 190 94 0 98 3 fis DNA-binding protein Fis Pectobacterium carotovorum
Q6DAJ8 1.44e-63 190 94 0 98 3 fis DNA-binding protein Fis Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
P0CW85 1.98e-61 184 97 0 93 3 fis DNA-binding protein Fis (Fragment) Proteus vulgaris
O52537 4.67e-61 183 96 0 93 3 fis DNA-binding protein Fis (Fragment) Klebsiella pneumoniae
B7VM54 1.09e-57 175 84 0 98 3 fis DNA-binding protein Fis Vibrio atlanticus (strain LGP32)
Q7MGT8 1.74e-57 174 84 0 98 3 fis DNA-binding protein Fis Vibrio vulnificus (strain YJ016)
P64129 1.74e-57 174 84 0 98 3 fis DNA-binding protein Fis Vibrio vulnificus (strain CMCP6)
P64128 1.74e-57 174 84 0 98 3 fis DNA-binding protein Fis Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
C3LQP6 1.74e-57 174 84 0 98 3 fis DNA-binding protein Fis Vibrio cholerae serotype O1 (strain M66-2)
P64127 1.74e-57 174 84 0 98 3 fis DNA-binding protein Fis Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F3S1 1.74e-57 174 84 0 98 3 fis DNA-binding protein Fis Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
A7N080 1.74e-57 174 84 0 98 3 fis DNA-binding protein Fis Vibrio campbellii (strain ATCC BAA-1116)
Q6LLY3 7.5e-57 173 83 0 98 3 fis DNA-binding protein Fis Photobacterium profundum (strain SS9)
B6ENA5 1.04e-54 167 79 0 98 3 fis DNA-binding protein Fis Aliivibrio salmonicida (strain LFI1238)
B5FC67 1.04e-54 167 79 0 98 3 fis DNA-binding protein Fis Aliivibrio fischeri (strain MJ11)
Q5E260 1.04e-54 167 79 0 98 3 fis DNA-binding protein Fis Aliivibrio fischeri (strain ATCC 700601 / ES114)
B0UV86 2.58e-53 164 79 0 97 3 fis DNA-binding protein Fis Histophilus somni (strain 2336)
Q0I1Y8 2.58e-53 164 79 0 97 3 fis DNA-binding protein Fis Histophilus somni (strain 129Pt)
P57902 3.1e-53 164 81 1 98 3 fis DNA-binding protein Fis Pasteurella multocida (strain Pm70)
Q65V72 3.17e-53 164 81 0 95 3 fis DNA-binding protein Fis Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)
P44966 2.1e-52 162 79 1 98 3 fis DNA-binding protein Fis Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A5UIB9 2.1e-52 162 79 1 98 3 fis DNA-binding protein Fis Haemophilus influenzae (strain PittGG)
A5UD91 2.1e-52 162 79 1 98 3 fis DNA-binding protein Fis Haemophilus influenzae (strain PittEE)
Q4QLT0 9.02e-52 160 78 1 98 3 fis DNA-binding protein Fis Haemophilus influenzae (strain 86-028NP)
A1SZI8 5.35e-49 153 71 1 99 3 fis DNA-binding protein Fis Psychromonas ingrahamii (strain DSM 17664 / CCUG 51855 / 37)
A6VM24 6.81e-49 153 73 1 99 3 fis DNA-binding protein Fis Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)
A4SJ84 2.26e-47 149 70 0 98 3 fis DNA-binding protein Fis Aeromonas salmonicida (strain A449)
A0KNY4 2.26e-47 149 70 0 98 3 fis DNA-binding protein Fis Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
Q7VNP1 1.01e-46 147 72 0 97 3 fis DNA-binding protein Fis Haemophilus ducreyi (strain 35000HP / ATCC 700724)
O54367 1.32e-46 147 72 0 97 3 fis DNA-binding protein Fis Mannheimia haemolytica
C4LAF3 1.88e-45 144 68 1 99 3 fis DNA-binding protein Fis Tolumonas auensis (strain DSM 9187 / NBRC 110442 / TA 4)
B8F6J8 1.9e-43 139 67 0 97 3 fis DNA-binding protein Fis Glaesserella parasuis serovar 5 (strain SH0165)
B8D7T5 2.06e-42 136 63 0 98 3 fis DNA-binding protein Fis Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7)
P57480 2.06e-42 136 63 0 98 3 fis DNA-binding protein Fis Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
B8D9I3 2.06e-42 136 63 0 98 3 fis DNA-binding protein Fis Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A)
A1RFA1 8.86e-40 130 63 3 102 3 fis DNA-binding protein Fis Shewanella sp. (strain W3-18-1)
Q0HQJ9 8.86e-40 130 63 3 102 3 fis DNA-binding protein Fis Shewanella sp. (strain MR-7)
Q0HN88 8.86e-40 130 63 3 102 3 fis DNA-binding protein Fis Shewanella sp. (strain MR-4)
A0KS72 8.86e-40 130 63 3 102 3 fis DNA-binding protein Fis Shewanella sp. (strain ANA-3)
A4YB21 8.86e-40 130 63 3 102 3 fis DNA-binding protein Fis Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
Q8EJR9 8.86e-40 130 63 3 102 3 fis DNA-binding protein Fis Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
A9L5E7 8.86e-40 130 63 3 102 3 fis DNA-binding protein Fis Shewanella baltica (strain OS195)
A6WTE7 8.86e-40 130 63 3 102 3 fis DNA-binding protein Fis Shewanella baltica (strain OS185)
A3D9J7 8.86e-40 130 63 3 102 3 fis DNA-binding protein Fis Shewanella baltica (strain OS155 / ATCC BAA-1091)
B8E682 8.86e-40 130 63 3 102 3 fis DNA-binding protein Fis Shewanella baltica (strain OS223)
Q088K0 1.26e-39 129 62 3 102 3 fis DNA-binding protein Fis Shewanella frigidimarina (strain NCIMB 400)
Q12S40 1.29e-39 129 62 3 102 3 fis DNA-binding protein Fis Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
B1KQE6 6.52e-39 128 61 3 102 3 fis DNA-binding protein Fis Shewanella woodyi (strain ATCC 51908 / MS32)
A8G0V0 6.52e-39 128 61 3 102 3 fis DNA-binding protein Fis Shewanella sediminis (strain HAW-EB3)
A1SAM2 9.88e-39 127 61 3 102 3 fis DNA-binding protein Fis Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
B0TJ39 1.24e-38 127 60 3 102 3 fis DNA-binding protein Fis Shewanella halifaxensis (strain HAW-EB4)
B8CHY1 1.33e-38 127 60 3 102 3 fis DNA-binding protein Fis Shewanella piezotolerans (strain WP3 / JCM 13877)
A8GZI0 1.33e-38 127 60 3 102 3 fis DNA-binding protein Fis Shewanella pealeana (strain ATCC 700345 / ANG-SQ1)
A3Q9Q3 1.56e-37 124 60 3 102 3 fis DNA-binding protein Fis Shewanella loihica (strain ATCC BAA-1088 / PV-4)
Q8K9F0 9.93e-37 122 57 1 99 3 fis DNA-binding protein Fis Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q9HUW0 2.25e-27 99 60 0 71 1 PA4853 Putative Fis-like DNA-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9PBY7 1.55e-23 89 48 1 87 3 XF_1998 Putative Fis-like DNA-binding protein Xylella fastidiosa (strain 9a5c)
Q8PD37 3.64e-23 87 46 0 81 3 XCC0508 Putative Fis-like DNA-binding protein Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
Q8PQ10 7.82e-23 87 48 0 76 3 XAC0522 Putative Fis-like DNA-binding protein Xanthomonas axonopodis pv. citri (strain 306)
Q87D75 1.22e-22 86 47 1 87 3 PD_0811 Putative Fis-like DNA-binding protein Xylella fastidiosa (strain Temecula1 / ATCC 700964)
P64131 1.63e-17 73 45 0 71 3 NMB1420 Putative Fis-like DNA-binding protein Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P64130 1.63e-17 73 45 0 71 3 NMA1632 Putative Fis-like DNA-binding protein Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
Q8Y231 1.66e-17 73 38 0 76 3 RSc0505 Putative Fis-like DNA-binding protein Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
P45671 1.73e-13 67 48 1 68 3 ntrC DNA-binding transcriptional regulator NtrC Azospirillum brasilense
P10577 2.71e-11 61 41 1 70 1 ntrC DNA-binding transcriptional regulator NtrC Rhizobium meliloti (strain 1021)
Q04848 3.2e-11 61 42 2 78 3 ntrC DNA-binding transcriptional regulator NtrC Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571)
P10576 1.2e-10 59 44 1 68 3 ntrC DNA-binding transcriptional regulator NtrC Bradyrhizobium sp. (strain RP501 Parasponia)
P09432 3.77e-10 58 42 2 68 3 ntrC DNA-binding transcriptional regulator NtrC Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P17899 0.00041 40 48 0 41 4 flbD Transcriptional regulatory protein FlbD Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11550
Feature type CDS
Gene fis
Product DNA-binding transcriptional regulator Fis
Location 460556 - 460852 (strand: -1)
Length 297 (nucleotides) / 98 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_757
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02954 Bacterial regulatory protein, Fis family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2901 Transcription (K) K DNA-binding protein Fis (factor for inversion stimulation)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03557 Fis family transcriptional regulator, factor for inversion stimulation protein Biofilm formation - Vibrio cholerae -

Protein Sequence

MFEQRVNSDVLTVATVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNELYELVLAEVEQPLLDMVMQYTRGNQTRAATMMGINRGTLRKKLKKYGMN

Flanking regions ( +/- flanking 50bp)

GCATATTTTGAAAATTTTTTGCGTAAATAAAGAAAAGAGCTGACAGAACTATGTTCGAACAACGCGTAAATTCTGACGTACTAACCGTCGCTACTGTAAATTCACAAGATCAGGTAACACAGAAACCGTTACGTGATTCAGTTAAGCAGGCATTGAAGAACTATTTTGCTCAATTAAACGGTCAGGATGTTAATGAACTGTATGAGCTGGTGCTGGCTGAAGTTGAACAGCCACTGTTGGACATGGTTATGCAATACACCCGTGGTAACCAGACCCGTGCTGCTACAATGATGGGTATCAACCGCGGTACACTGCGTAAAAAACTGAAAAAATACGGCATGAATTAATTCATAACGTATAATGCTTTGAATTGAAAAGCCTTTTCTGTATTTCGGGA