COG2901


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG2901
Protein list: lists the 7 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.

Description

Description DNA-binding protein Fis (factor for inversion stimulation)
Function(s) descr. Transcription (K)

Occurence in the database

COG2901 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_828 FBDBKF_03380 77904 78200 1 fis DNA-binding transcriptional regulator Fis Morganella morganii S1
1 group_828 EHELCC_07155 168903 169199 -1 fis DNA-binding transcriptional regulator Fis Morganella morganii S2
2 group_828 NLDBIP_07480 168776 169072 -1 fis DNA-binding transcriptional regulator Fis Morganella morganii S4
3 group_828 LHKJJB_07015 132522 132818 -1 fis DNA-binding transcriptional regulator Fis Morganella morganii S3
4 group_828 HKOGLL_03915 100569 100865 1 fis DNA-binding transcriptional regulator Fis Morganella morganii S5
5 group_828 F4V73_RS11550 460556 460852 -1 fis DNA-binding transcriptional regulator Fis Morganella psychrotolerans
6 group_828 PMI_RS18020 3959637 3959933 -1 fis DNA-binding transcriptional regulator Fis Proteus mirabilis HI4320