Homologs in group_1663

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11530 FBDBKF_11530 28.7 Morganella morganii S1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
EHELCC_17450 EHELCC_17450 28.7 Morganella morganii S2 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
NLDBIP_18660 NLDBIP_18660 28.7 Morganella morganii S4 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
LHKJJB_17890 LHKJJB_17890 28.7 Morganella morganii S3 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
HKOGLL_18760 HKOGLL_18760 28.7 Morganella morganii S5 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
F4V73_RS08130 F4V73_RS08130 25.8 Morganella psychrotolerans - TetR/AcrR family transcriptional regulator

Distribution of the homologs in the orthogroup group_1663

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1663

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7WY76 5.97e-17 78 30 0 147 4 yezE Uncharacterized HTH-type transcriptional regulator YezE Bacillus subtilis (strain 168)
P39334 2.65e-14 71 29 1 142 1 bdcR HTH-type transcriptional repressor BdcR Escherichia coli (strain K12)
P75952 4.18e-12 65 26 5 178 1 comR HTH-type transcriptional repressor ComR Escherichia coli (strain K12)
Q9RMY4 6.26e-05 45 28 3 144 4 pXO2-48 Uncharacterized HTH-type transcriptional regulator pXO2-48/BXB0055/GBAA_pXO2_0055 Bacillus anthracis
P94548 0.000142 44 23 2 147 1 fadR Fatty acid metabolism regulator protein Bacillus subtilis (strain 168)
Q8NQ97 0.000198 43 34 0 46 1 acnR HTH-type transcriptional repressor AcnR Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q8FTA6 0.000227 43 34 0 46 3 acnR HTH-type transcriptional repressor AcnR Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
P9WMB9 0.000346 43 29 0 78 1 kstR2 HTH-type transcriptional repressor KstR2 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMB8 0.000346 43 29 0 78 3 kstR2 HTH-type transcriptional repressor KstR2 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A0R4Z6 0.000761 42 26 0 79 1 kstR2 HTH-type transcriptional repressor KstR2 Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
P40950 0.001 42 32 0 53 4 yuxN Uncharacterized HTH-type transcriptional regulator YuxN Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11545
Feature type CDS
Gene -
Product TetR/AcrR family transcriptional regulator
Location 458497 - 459078 (strand: -1)
Length 582 (nucleotides) / 193 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1663
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF00440 Bacterial regulatory proteins, tetR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1309 Transcription (K) K DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K16137 TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon - -

Protein Sequence

MSGRPKEYDDEKVIESAMNVFWNNGYEASSTQMLCQETGLGRGSLYHAFGNKQGLYEKALRHYQDVGIIAQKDILNSQGTAKERLMKLLQWGIATDLDSGSSRGCLALHSVLERSPKDPEIQSINRHYLHRLESLINKVITRGIEAGEFQVTPNSSVASKAFLAGYYGLRIMGVTVGDPCFLNATAEGIIAKM

Flanking regions ( +/- flanking 50bp)

CAGTCAAAAACTGATTAACTTAGATCAATTGAATTATGAGGTACTGATTTATGAGCGGACGACCAAAGGAATATGACGACGAAAAAGTGATTGAGTCAGCCATGAATGTATTCTGGAATAACGGTTACGAAGCAAGCAGTACACAGATGCTTTGTCAGGAAACCGGTCTTGGCCGGGGCAGTCTTTACCATGCTTTCGGTAACAAACAGGGACTATATGAAAAAGCTCTGCGGCACTATCAGGACGTTGGTATCATTGCTCAAAAAGACATTCTGAACAGTCAGGGAACAGCCAAAGAACGCCTGATGAAATTGCTTCAGTGGGGGATCGCCACCGACCTTGATAGTGGAAGTTCACGCGGCTGCCTGGCCTTACATTCCGTTTTGGAACGAAGCCCTAAAGACCCTGAAATTCAGTCGATTAACCGCCATTACCTCCACCGGTTAGAATCGCTGATTAACAAAGTCATTACCCGGGGTATAGAAGCAGGAGAGTTTCAGGTTACCCCAAATAGCAGCGTTGCCAGCAAAGCCTTTCTTGCCGGGTATTACGGACTTAGGATAATGGGTGTTACCGTCGGTGATCCCTGTTTTTTAAATGCCACAGCAGAAGGGATAATTGCAAAAATGTAATATCCCTTAAATCTATTTTTTACATCACATTCTTTACTGATAAGTAAACA