Homologs in group_1663

Help

6 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11530 FBDBKF_11530 100.0 Morganella morganii S1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
NLDBIP_18660 NLDBIP_18660 100.0 Morganella morganii S4 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
LHKJJB_17890 LHKJJB_17890 100.0 Morganella morganii S3 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
HKOGLL_18760 HKOGLL_18760 100.0 Morganella morganii S5 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
F4V73_RS08130 F4V73_RS08130 80.7 Morganella psychrotolerans - TetR/AcrR family transcriptional regulator
F4V73_RS11545 F4V73_RS11545 28.7 Morganella psychrotolerans - TetR/AcrR family transcriptional regulator

Distribution of the homologs in the orthogroup group_1663

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1663

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75952 1.18e-32 119 32 1 192 1 comR HTH-type transcriptional repressor ComR Escherichia coli (strain K12)
Q7WY76 1.05e-18 83 27 2 193 4 yezE Uncharacterized HTH-type transcriptional regulator YezE Bacillus subtilis (strain 168)
P39334 3.94e-15 73 25 3 201 1 bdcR HTH-type transcriptional repressor BdcR Escherichia coli (strain K12)
Q8G2M8 8.7e-07 50 24 4 172 1 bepR HTH-type transcriptional repressor BepR Brucella suis biovar 1 (strain 1330)
Q6NH62 3.94e-05 46 25 3 172 3 acnR HTH-type transcriptional repressor AcnR Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis)
Q8NQ97 0.000175 44 25 3 172 1 acnR HTH-type transcriptional repressor AcnR Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q8FTA6 0.000297 43 26 6 190 3 acnR HTH-type transcriptional repressor AcnR Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
P32398 0.000451 43 27 5 161 4 yhgD Uncharacterized HTH-type transcriptional regulator YhgD Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_17450
Feature type CDS
Gene acrR
Product DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
Location 2279 - 2890 (strand: -1)
Length 612 (nucleotides) / 203 (amino acids)

Contig

Accession ZDB_233
Length 42053 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1663
Orthogroup size 7
N. genomes 6

Actions

Genomic region

Domains

PF00440 Bacterial regulatory proteins, tetR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1309 Transcription (K) K DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K22041 TetR/AcrR family transcriptional regulator, copper-responsive repressor - -

Protein Sequence

MMAGRPREFDREVALRKAEQVFWQRGYEGTSMSDLVAALGIASARIYAAFGSKENLFREAIALYLAEEGAFADAALKEPDTRSAIKKLLTGAVDTYTRDDRPHGCMVVLSLTNYSADNEAIMHWLADHRRERTSGIIQRLRRGAESGDLPEHTDTQALGDYVATLLHGISVQARDGVSRDRLLAMTEIAMHMFDLMTASPATH

Flanking regions ( +/- flanking 50bp)

ACGATAAAGAACTGGTAGCATTTGCCTCAGATAAACTATACGGAGAAAATATGATGGCCGGCAGACCACGGGAATTTGATCGCGAAGTTGCATTACGCAAGGCTGAACAGGTGTTCTGGCAGCGCGGTTATGAAGGTACATCCATGTCTGATCTGGTTGCGGCGCTGGGTATTGCATCCGCCCGGATCTATGCGGCCTTCGGGTCGAAAGAAAATCTGTTCCGGGAGGCGATAGCCCTTTATCTGGCGGAAGAAGGTGCATTTGCGGATGCGGCGCTGAAAGAGCCGGATACCCGCAGTGCTATCAAAAAGCTGCTTACCGGTGCCGTTGATACCTACACCCGGGATGACCGGCCGCACGGCTGTATGGTGGTATTGTCACTGACCAATTATTCTGCTGATAATGAAGCCATTATGCACTGGCTGGCAGACCACCGCCGGGAACGGACAAGCGGGATCATACAGCGTCTGCGCCGGGGGGCTGAGTCCGGTGATTTACCGGAACATACGGATACACAGGCACTCGGGGACTATGTGGCAACACTGCTGCACGGAATTTCTGTCCAGGCTCGGGATGGTGTCAGCCGTGACCGCCTGCTGGCCATGACAGAGATTGCCATGCACATGTTTGATCTCATGACCGCCTCACCGGCCACACACTGAATCTGTTTCTGTCTGCAGGAGAATCTCTGATGTCCTCTTCCGTCCGCCCG