Homologs in group_2610

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03495 FBDBKF_03495 95.7 Morganella morganii S1 gntT H+/gluconate symporter GntT or related permease, GntP/DsdX family
EHELCC_07040 EHELCC_07040 95.7 Morganella morganii S2 gntT H+/gluconate symporter GntT or related permease, GntP/DsdX family
NLDBIP_07365 NLDBIP_07365 95.7 Morganella morganii S4 gntT H+/gluconate symporter GntT or related permease, GntP/DsdX family
LHKJJB_06900 LHKJJB_06900 95.7 Morganella morganii S3 gntT H+/gluconate symporter GntT or related permease, GntP/DsdX family
HKOGLL_04030 HKOGLL_04030 95.7 Morganella morganii S5 gntT H+/gluconate symporter GntT or related permease, GntP/DsdX family

Distribution of the homologs in the orthogroup group_2610

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2610

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q57493 0.0 568 73 0 419 3 HI_0092 Uncharacterized transporter HI_0092 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P39344 1.4e-10 66 24 10 367 1 idnT Gnt-II system L-idonate transporter Escherichia coli (strain K12)
P71364 2.51e-09 62 25 5 215 3 HI_1015 Uncharacterized permease HI_1015 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q46892 5.04e-08 58 32 3 165 1 ygbN Inner membrane permease YgbN Escherichia coli (strain K12)
P39835 1.7e-06 53 23 9 416 1 gntT High-affinity gluconate transporter Escherichia coli (strain K12)
Q9ZIJ1 3.81e-06 52 25 15 423 3 gnuT Gluconate permease Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0AC94 7.21e-06 51 21 14 428 1 gntP High-affinity gluconate transporter Escherichia coli (strain K12)
P0AC95 7.21e-06 51 21 14 428 3 gntP High-affinity gluconate transporter Escherichia coli O157:H7
P39357 2.66e-05 50 24 5 213 3 yjhF Uncharacterized permease YjhF Escherichia coli (strain K12)
P42314 0.00037 46 31 3 137 3 yxjC Uncharacterized transporter YxjC Bacillus subtilis (strain 168)
P46832 0.000489 45 25 6 207 3 gntP Gluconate permease Bacillus licheniformis

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11400
Feature type CDS
Gene -
Product SLC13 family permease
Location 422066 - 423331 (strand: 1)
Length 1266 (nucleotides) / 421 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2610
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF02447 GntP family permease

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2610 Carbohydrate transport and metabolism (G) G H+/gluconate symporter GntT or related permease, GntP/DsdX family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03299 gluconate:H+ symporter, GntP family - -

Protein Sequence

MVTVSALGAMVALVVAIGLILKKVPPVYGMMAGALAGGLVGGADLIQTVTLMVTGAQGITNAVLRILAAGILAGVLIESGAANTIAETIVRKVGEKRALLALAVATLLLTAVGVFIDVAVITVSPIALAIAHRADLSKMAILLAMIGGGKAGNVMSPNPNTIAAADNFNVPLTSLMAAGIVPGIFGLIVAYFLAKRLVHRGSKVAKEELIVTQHGELPGFWASMSAPLVAIFLLSLRPIAGISVDPLIALPLGGLTGALIMGRIRQSNHFITSGLSRMAPVAIMLLGTGTLAGIIANSGLKDVLINGLTASGLPSYLLAPISGALMSMATASTTAGTAVASAVFSSTLLDLGVTALAGAAMVHAGAVVLDQMPHGSFFHATGGCVNMQVHERLKLLPYETLVGLSIAIVSTLIFGVFGFGG

Flanking regions ( +/- flanking 50bp)

AATAAACTCCGTTTTATTCAAATAATCATAATTACCGGAGGAGACTGCTCATGGTGACAGTTTCAGCATTGGGCGCAATGGTTGCGCTGGTTGTGGCAATAGGGTTAATACTTAAAAAAGTACCGCCGGTTTACGGGATGATGGCGGGCGCACTGGCCGGAGGGCTGGTTGGCGGGGCTGATCTGATACAGACGGTGACGCTGATGGTGACCGGCGCACAGGGCATAACTAATGCTGTGCTGCGTATTCTTGCCGCCGGTATTCTGGCAGGGGTTCTGATTGAGTCAGGTGCGGCAAATACCATTGCCGAAACCATCGTCCGCAAAGTCGGTGAAAAGCGGGCATTGCTGGCATTGGCCGTCGCGACGCTGTTACTGACTGCTGTCGGCGTATTTATTGATGTTGCGGTAATTACGGTTTCACCGATTGCGCTGGCGATAGCACACCGCGCTGATCTCTCCAAAATGGCGATTCTGCTGGCAATGATTGGCGGCGGGAAAGCCGGTAACGTGATGTCACCGAACCCGAACACCATTGCGGCGGCAGATAACTTTAACGTGCCGCTCACCTCACTGATGGCAGCAGGTATTGTCCCCGGGATTTTTGGGCTGATTGTGGCGTATTTCCTGGCGAAACGTCTGGTTCACCGTGGCTCGAAAGTGGCAAAAGAAGAGCTGATTGTGACGCAGCATGGTGAATTACCGGGTTTCTGGGCATCAATGAGTGCACCGCTGGTCGCGATTTTTCTGCTGTCACTGCGTCCGATTGCGGGTATCAGTGTTGATCCGCTGATCGCACTGCCGCTGGGTGGATTAACCGGGGCGCTGATTATGGGGCGCATCCGCCAATCCAATCACTTTATTACTTCTGGTCTGAGCCGTATGGCACCGGTTGCGATTATGCTGCTGGGTACCGGAACACTGGCGGGTATTATCGCCAACTCCGGGTTAAAAGATGTACTGATTAACGGGCTGACCGCCTCGGGATTACCGTCCTATTTACTGGCACCGATTTCCGGGGCGCTGATGTCGATGGCAACCGCCTCAACAACCGCCGGTACTGCGGTGGCATCTGCGGTATTCAGCTCCACACTGCTTGACCTTGGTGTGACAGCACTGGCAGGTGCGGCGATGGTCCACGCCGGTGCCGTGGTACTTGATCAGATGCCGCACGGCAGTTTCTTCCATGCGACGGGCGGTTGTGTGAATATGCAGGTACATGAGCGTCTGAAGCTGCTGCCATATGAAACCCTGGTCGGGCTGTCGATAGCCATTGTTTCCACACTGATTTTTGGTGTCTTCGGATTTGGCGGTTAAAGGAGTAAGTATGAAAATAGTGATAGCACCGGATTCTTTTAAAGAGAGCC