Homologs in group_769

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03545 FBDBKF_03545 88.9 Morganella morganii S1 - DUF2500 domain-containing protein
EHELCC_06990 EHELCC_06990 88.9 Morganella morganii S2 - DUF2500 domain-containing protein
NLDBIP_07315 NLDBIP_07315 88.9 Morganella morganii S4 - DUF2500 domain-containing protein
LHKJJB_06850 LHKJJB_06850 88.9 Morganella morganii S3 - DUF2500 domain-containing protein
HKOGLL_04080 HKOGLL_04080 88.9 Morganella morganii S5 - DUF2500 domain-containing protein
PMI_RS17925 PMI_RS17925 41.0 Proteus mirabilis HI4320 - DUF2500 family protein

Distribution of the homologs in the orthogroup group_769

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_769

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37615 8.04e-15 68 33 2 115 4 yhhM Uncharacterized protein YhhM Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11355
Feature type CDS
Gene -
Product DUF2500 domain-containing protein
Location 413727 - 414080 (strand: 1)
Length 354 (nucleotides) / 117 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_769
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF10694 Protein of unknown function (DUF2500)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3127 Secondary metabolites biosynthesis, transport and catabolism (Q) Q Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component

Protein Sequence

MNKFGLLGFIVAALIIVLAARRFLEQRKQNEINDSSVVTTSEVTVAEKKDYPYPNMRSRERDVVFPETFRYEVHFRPLSGKTIVVYIKESEYKEITLHSRGTLFMQGTRFIRYEPLR

Flanking regions ( +/- flanking 50bp)

CCGTATTTACAGGTCACGATCAACAAGATTGCAGGAAAACAAGCATACCCATGAATAAATTCGGATTATTAGGTTTTATTGTCGCCGCCCTTATTATTGTGCTGGCAGCGCGTCGTTTCCTCGAACAGAGAAAGCAAAATGAGATTAATGACAGCTCTGTCGTGACGACATCTGAAGTGACGGTAGCAGAGAAAAAGGATTATCCGTACCCGAATATGCGCTCACGCGAGCGGGATGTGGTCTTCCCGGAAACCTTCCGTTATGAGGTGCATTTCCGCCCGCTGTCCGGGAAAACAATCGTGGTGTATATAAAAGAGTCGGAATATAAGGAGATAACCCTGCATTCACGCGGAACGCTTTTTATGCAGGGCACCCGTTTTATCCGTTATGAGCCGCTGCGCTGATCAGGGCTGGTCGTGTTTATCGTCATCGCCCGCAGGCGGGGATTTCAGTT