Homologs in group_2794

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08975 FBDBKF_08975 83.9 Morganella morganii S1 - Fimbrial protein
EHELCC_10435 EHELCC_10435 83.9 Morganella morganii S2 - Fimbrial protein
NLDBIP_10780 NLDBIP_10780 83.9 Morganella morganii S4 - Fimbrial protein
LHKJJB_10575 LHKJJB_10575 83.9 Morganella morganii S3 - Fimbrial protein
HKOGLL_13635 HKOGLL_13635 83.9 Morganella morganii S5 - Fimbrial protein

Distribution of the homologs in the orthogroup group_2794

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2794

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P62532 6.11e-23 92 36 3 159 1 papK Fimbrial adapter PapK Escherichia coli
P62533 6.11e-23 92 36 3 159 3 papK Fimbrial adapter PapK Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P42191 6.08e-22 90 37 4 159 1 prsK Protein PrsK Escherichia coli
P53521 4.75e-17 77 32 3 181 3 pmfF Putative minor fimbrial subunit PmfF Proteus mirabilis (strain HI4320)
Q8X5K5 8.16e-15 71 31 6 183 2 lpfA Probable major fimbrial subunit LpfA Escherichia coli O157:H7
P76499 3.54e-14 70 29 5 168 2 yfcP Uncharacterized fimbrial-like protein YfcP Escherichia coli (strain K12)
P43660 2.28e-13 67 31 6 183 3 lpfA Long polar fimbria protein A Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q03011 2.99e-13 67 29 2 166 1 mrpA Major MR/P fimbria protein Proteus mirabilis (strain HI4320)
P13421 1.86e-12 65 30 2 148 1 smfA Fimbria A protein Serratia marcescens
P75860 2.48e-12 64 30 4 155 2 ycbV Uncharacterized fimbrial-like protein YcbV Escherichia coli (strain K12)
P62605 3.65e-10 59 31 5 154 3 pilC Type-1 fimbrial protein, C chain Escherichia coli
P62606 3.65e-10 59 31 5 154 3 pilC Type-1 fimbrial protein, C chain Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P37926 4.84e-09 56 30 6 178 3 fimF Fimbrial-like protein FimF Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P37920 1.45e-08 55 31 6 157 3 fimA Type-1 fimbrial protein, A chain Salmonella typhi
Q04681 1.5e-08 55 26 2 150 1 pmfA Major fimbrial subunit Proteus mirabilis (strain HI4320)
P39264 1.7e-08 54 26 7 183 1 fimI Fimbrin-like protein FimI Escherichia coli (strain K12)
P77789 5.29e-08 53 34 4 119 3 ydeS Uncharacterized fimbrial-like protein YdeS Escherichia coli (strain K12)
P37921 7.98e-08 53 30 6 157 1 fimA Type-1 fimbrial protein, A chain Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P55223 9.77e-08 52 30 6 157 3 None Fimbrial subunit type 1 Salmonella typhimurium
P12903 3.25e-06 48 30 6 156 1 fim Fimbrial subunit type 1 Klebsiella pneumoniae
P04127 1.76e-05 46 27 5 155 1 papA Pap fimbrial major pilin protein Escherichia coli
P42184 2.93e-05 45 24 4 156 1 prsA PRS fimbrial major pilin protein (Fragment) Escherichia coli
P04740 4.31e-05 45 25 6 164 3 KS71A KS71A fimbrillin Escherichia coli
P39834 0.000104 44 25 1 74 3 ygiL Uncharacterized fimbrial-like protein YgiL Escherichia coli (strain K12)
P62607 0.000752 42 25 5 162 3 F7-2 F7-2 fimbrial protein Escherichia coli
P62608 0.000752 42 25 5 162 3 F7-2 F7-2 fimbrial protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10990
Feature type CDS
Gene -
Product fimbrial protein
Location 339627 - 340151 (strand: 1)
Length 525 (nucleotides) / 174 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2794
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MKIFIKHVAVLCSGLLMYSAAHSTDVEIKGRLVFEPCTLSAKSENISLSFGTIVRNYFYTADKTPSEPFTIELENCDTGIGNGAFVTFRGTESSALPGLLVPDNGSLPGLAIGIETPEGKPLPLNKTSPAYALSDGTTTLNFQGYVQAEPDAIKDKTLVTGDLSATATFEITYP

Flanking regions ( +/- flanking 50bp)

AAAAGATGTTAAACCGGGCTGATGTGAAATCGCAGATCAGGAGCAAAAAAATGAAAATATTCATTAAACATGTGGCTGTGTTGTGTTCCGGTCTGCTGATGTATTCGGCGGCACACAGTACGGATGTTGAAATCAAAGGCCGCCTGGTGTTTGAGCCGTGCACGCTGTCTGCGAAGAGTGAAAACATTTCTCTGTCGTTTGGCACAATAGTCAGAAATTATTTTTATACAGCGGACAAAACACCGTCGGAGCCGTTCACTATTGAGCTGGAAAATTGTGATACCGGCATCGGTAACGGAGCCTTTGTTACTTTTCGCGGTACAGAAAGCTCCGCGCTGCCGGGATTATTAGTGCCGGATAACGGCTCGTTACCGGGGCTTGCTATTGGTATTGAAACACCGGAAGGAAAACCGTTGCCGCTGAATAAAACCAGCCCGGCGTATGCACTGAGTGATGGCACGACCACACTGAATTTTCAGGGATATGTACAGGCAGAGCCGGATGCAATTAAGGATAAAACATTGGTAACAGGTGATTTGTCGGCGACTGCCACATTTGAAATCACTTATCCGTAGCCCGTTTTAGCGGATAACTGACAGGATACTGTAATGAATTTAGCGTGTGT