Homologs in group_4015

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4015

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4015

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P22595 0.000682 42 26 7 160 3 fimA Type-1 fimbrial protein subunit Serratia marcescens

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10910
Feature type CDS
Gene -
Product fimbrial protein
Location 324544 - 325089 (strand: 1)
Length 546 (nucleotides) / 181 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000002
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4015
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MMIKKTRISFILFVTAVCNMTISFAETVEVRINGRITSNTCELKTPDTHVQLGHWFTHSQSGIGSGVNSVSPAVPFALEFSCPSGAGVKAKLDGNRYSPDSQYYIGLDKGENSARGVVIEVHHEKSSGSWQSVRYDSAISLISKSSSGTNKAEMKAFYRQVDPQITGGSGNSSVTMTLEYQ

Flanking regions ( +/- flanking 50bp)

GCCATCCTTGATATGACAGTCACTTACCAGTGAAGAACAACAGAGTGCTAATGATGATAAAAAAAACACGTATTTCATTTATCTTATTTGTGACGGCAGTATGCAATATGACCATCAGTTTTGCTGAAACAGTTGAAGTCCGGATCAACGGTCGGATCACCAGCAATACCTGTGAGCTGAAAACACCGGATACTCATGTTCAGTTGGGACATTGGTTTACCCACAGTCAGAGCGGGATTGGCAGTGGTGTTAATTCAGTTTCACCGGCAGTACCTTTTGCGCTGGAATTCAGCTGTCCGTCCGGTGCCGGCGTTAAAGCAAAACTGGACGGAAACCGCTATTCCCCTGATAGTCAGTATTACATCGGATTAGATAAAGGTGAAAACTCAGCAAGAGGGGTGGTTATTGAAGTTCATCACGAGAAATCATCAGGAAGCTGGCAGTCAGTTCGTTATGATTCGGCGATATCCCTGATAAGTAAAAGTTCTTCAGGAACAAATAAAGCTGAAATGAAGGCATTTTATCGCCAGGTTGATCCTCAGATTACCGGCGGTAGTGGCAACTCCTCAGTCACGATGACACTGGAATACCAGTAAAATACTATACCCTTATTCATTCAGGTTGCAGGTTCGTTGGCCGCACTCAG