Homologs in group_1945

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14605 FBDBKF_14605 28.0 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
EHELCC_15410 EHELCC_15410 28.0 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_15940 NLDBIP_15940 28.0 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
LHKJJB_15900 LHKJJB_15900 28.0 Morganella morganii S3 fimA Pilin (type 1 fimbrial protein)
HKOGLL_15020 HKOGLL_15020 28.0 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)
F4V73_RS07400 F4V73_RS07400 29.8 Morganella psychrotolerans - fimbrial protein

Distribution of the homologs in the orthogroup group_1945

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1945

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10890
Feature type CDS
Gene -
Product fimbrial protein
Location 319462 - 320007 (strand: 1)
Length 546 (nucleotides) / 181 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1945
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MKLNNILLASSVITALSLSSFANAGPLSDTANIKFSGSFQDETCAITVDGYDAEKATANVLLGSHKGSDLAAVSSVTPAVKFSMNFAACGGISVAQVKFVGGQSTAGIFDVADKNKSVVGIGLSKTADGTDYFQTGAVVDRVDIKDGSAMKDYFARFVKLSDEEIEEGNTSATVQVDVTYG

Flanking regions ( +/- flanking 50bp)

CATCATAAAAAGATGTTATTTACGGGCGAAACTCACTTTAAGGCTTAATTATGAAACTCAATAATATCTTACTGGCATCATCTGTTATTACTGCGCTGTCTTTATCTTCATTTGCTAATGCGGGTCCGTTAAGTGATACCGCAAATATTAAATTCAGCGGTTCTTTTCAGGATGAAACCTGTGCTATTACAGTGGATGGATATGATGCAGAAAAAGCAACAGCGAATGTCTTATTAGGAAGCCATAAAGGTTCTGATTTAGCGGCTGTTTCTTCTGTAACGCCGGCGGTTAAGTTTTCTATGAATTTTGCAGCATGTGGCGGTATTTCTGTTGCACAGGTTAAATTTGTCGGCGGACAAAGCACTGCGGGTATTTTCGATGTAGCAGATAAGAATAAATCTGTTGTTGGTATCGGATTAAGTAAAACAGCCGATGGTACCGATTATTTCCAGACCGGCGCTGTTGTTGACCGTGTCGATATTAAAGATGGTTCAGCGATGAAGGATTATTTTGCCCGTTTCGTGAAACTCTCTGATGAAGAAATTGAAGAAGGCAATACCAGTGCAACTGTTCAGGTTGATGTGACCTACGGCTGATATACCCTTATTCATTCAAACTACAGGTTCGTTGGCTGAATCTTGAATGA