Homologs in group_1458

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09315 FBDBKF_09315 52.9 Morganella morganii S1 fliN Flagellar motor switch/type III secretory pathway protein FliN
EHELCC_10095 EHELCC_10095 52.9 Morganella morganii S2 fliN Flagellar motor switch/type III secretory pathway protein FliN
NLDBIP_10440 NLDBIP_10440 52.9 Morganella morganii S4 fliN Flagellar motor switch/type III secretory pathway protein FliN
LHKJJB_10915 LHKJJB_10915 52.9 Morganella morganii S3 fliN Flagellar motor switch/type III secretory pathway protein FliN
HKOGLL_13975 HKOGLL_13975 52.9 Morganella morganii S5 fliN Flagellar motor switch/type III secretory pathway protein FliN
PMI_RS13250 PMI_RS13250 29.7 Proteus mirabilis HI4320 - FliM/FliN family flagellar motor switch protein

Distribution of the homologs in the orthogroup group_1458

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1458

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10650
Feature type CDS
Gene -
Product FliM/FliN family flagellar motor switch protein
Location 260275 - 261042 (strand: 1)
Length 768 (nucleotides) / 255 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1458
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01052 Type III flagellar switch regulator (C-ring) FliN C-term

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1886 Cell motility (N)
Intracellular trafficking, secretion, and vesicular transport (U)		 NU Flagellar motor switch/type III secretory pathway protein FliN

Protein Sequence

MKNSQHILTLAIEVELLIKYLIGENDIPWEVIPEGYLVSLIEKNNKPLSLPLFSFEEYQLSVCTENSAGSPEATLWFEEHGIDFYLIDAQGYFDITSPLITQNDKVSVIGGIYIGHTNTDLGMIHSLNEGDILLIVHNHYIMRAGGYFQMTLEQREDGAMITEAGIVTEEPIVIPQQAVFDSNKLSVRVDFLRHRRVYPLGELLALRQGDRLILPEADTGSLILEIDGQRFAQGELVRIGEHFAVEIHHLFHKDA

Flanking regions ( +/- flanking 50bp)

CATTACCGGAAAAACAACATAAAAATAATAGCCGGATAATAATATGCCAATTGAAAAACTCACAGCATATATTAACACTCGCTATTGAAGTGGAGTTGTTAATTAAATATCTAATTGGTGAGAATGATATTCCGTGGGAAGTTATACCTGAAGGTTATCTTGTTTCCCTGATTGAGAAAAATAATAAACCATTATCCCTGCCTTTATTTTCGTTTGAAGAGTATCAGTTATCTGTCTGCACAGAAAATTCCGCCGGTAGCCCGGAAGCCACTCTGTGGTTTGAAGAGCACGGAATAGATTTTTATCTGATTGATGCTCAAGGGTATTTTGACATCACCTCACCGCTGATTACACAGAACGATAAGGTATCTGTTATCGGCGGTATTTATATCGGACACACCAATACAGATCTTGGAATGATCCACAGTCTTAATGAGGGGGATATCCTTCTTATTGTACATAACCACTACATTATGCGGGCAGGAGGCTATTTTCAGATGACACTGGAACAGAGAGAAGACGGAGCTATGATAACGGAGGCTGGTATTGTTACAGAAGAACCCATAGTTATACCGCAACAGGCTGTTTTTGATAGTAATAAACTATCTGTACGGGTAGATTTCCTGCGGCACCGGCGAGTTTACCCGCTGGGAGAATTGCTGGCATTACGACAGGGGGACAGATTGATATTGCCGGAGGCTGATACGGGTTCTCTCATCCTGGAAATCGACGGACAACGCTTTGCTCAGGGGGAGCTGGTTCGTATCGGGGAGCATTTTGCTGTCGAGATTCACCACCTTTTTCATAAGGATGCGTGATGACTGACAGCGCCGTATCCATGATGGTGATGCTGGCGGCGGCATCATTG