Homologs in group_2328

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18110 FBDBKF_18110 97.2 Morganella morganii S1 ulaA PTS ascorbate transporter subunit IIC
EHELCC_16810 EHELCC_16810 97.2 Morganella morganii S2 ulaA PTS ascorbate transporter subunit IIC
NLDBIP_17640 NLDBIP_17640 97.2 Morganella morganii S4 ulaA PTS ascorbate transporter subunit IIC
LHKJJB_17560 LHKJJB_17560 97.2 Morganella morganii S3 ulaA PTS ascorbate transporter subunit IIC
HKOGLL_17375 HKOGLL_17375 97.2 Morganella morganii S5 ulaA PTS ascorbate transporter subunit IIC
PMI_RS08705 PMI_RS08705 40.8 Proteus mirabilis HI4320 - PTS ascorbate transporter subunit IIC

Distribution of the homologs in the orthogroup group_2328

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2328

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q328K4 1.53e-43 162 27 7 468 3 ulaA Ascorbate-specific PTS system EIIC component Shigella dysenteriae serotype 1 (strain Sd197)
Q8FAJ3 1.85e-43 162 27 7 468 3 ulaA Ascorbate-specific PTS system EIIC component Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q31TC4 2.09e-43 162 27 7 468 3 ulaA Ascorbate-specific PTS system EIIC component Shigella boydii serotype 4 (strain Sb227)
Q57GJ9 3.98e-43 161 27 7 468 3 ulaA Ascorbate-specific PTS system EIIC component Salmonella choleraesuis (strain SC-B67)
P39301 1.5e-42 159 27 7 468 1 ulaA Ascorbate-specific PTS system EIIC component Escherichia coli (strain K12)
Q8ZK90 1.74e-42 159 29 4 371 3 ulaA Ascorbate-specific PTS system EIIC component Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z172 2.67e-42 159 27 7 468 3 ulaA Ascorbate-specific PTS system EIIC component Salmonella typhi
Q5PJ48 3.35e-42 159 27 7 468 3 ulaA Ascorbate-specific PTS system EIIC component Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P0C184 3.59e-42 158 27 7 468 5 ulaA Ascorbate-specific PTS system EIIC component Shigella sonnei (strain Ss046)
Q83II9 4.4e-42 158 27 6 466 3 ulaA Ascorbate-specific PTS system EIIC component Shigella flexneri
Q8XDJ5 7.95e-41 155 27 7 468 3 ulaA Ascorbate-specific PTS system EIIC component Escherichia coli O157:H7
P75291 3.53e-22 103 26 9 419 3 ulaA Ascorbate-specific PTS system EIIC component Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10315
Feature type CDS
Gene -
Product PTS ascorbate transporter subunit IIC
Location 174139 - 175533 (strand: 1)
Length 1395 (nucleotides) / 464 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2328
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF03611 PTS system sugar-specific permease component

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3037 Carbohydrate transport and metabolism (G) G Ascorbate-specific PTS system IIC component UlaA

Kegg Ortholog Annotation(s)

Protein Sequence

MTYILSFLTEIFSQPAFLMGIISLVGLLALRSPVNKLLTGTLKPILGYLMLSAGAGVIVANLNPLGGIIEAGFNIRGVIPNNEAIVSVAQKVLGVETMSILLLGFIFNLAIARLTKYKYIFLTGHHSFFLACLFSAVLQAASFKGWEMVLIGGFLLGSWSAISPAIGQRYTKRVTEDGGIAMGHFGSLGYYLSAWIAGKVGKAEDSFADTEISEKWGFLRDTTVTTGIVMVVIYLVCSIVAGSGYISTITEQNMVIFSIITGLQFAVGVAIVYSGVRLILGDLVPAFQGISQKLIPNSIPAVDCAVFFTFSPTAVVIGFISSFIGGLVGMLMLGGLGMALIIPGMVPHFFCGGTSGVFADKLGGKKGCIIASFIGGIFLAFLPAMLLPALGNLGFENSTFADFDFAVWGIVIGEAFTHFGQIAIYLICFVLLLALLIPFAFKSVKVVGDTLSYDELIEKDRAHK

Flanking regions ( +/- flanking 50bp)

CATCCTGAATGATGTCGGGCATAGTTCATTTCTTTTACAGGAATTAAAATATGACTTATATTCTCTCATTTCTGACTGAGATATTCAGTCAGCCTGCTTTCCTTATGGGTATTATTTCCCTGGTGGGATTGCTGGCATTACGATCACCGGTTAATAAATTATTAACCGGTACATTAAAACCCATTCTTGGTTATTTAATGCTGAGTGCAGGTGCCGGTGTTATTGTGGCAAACCTGAACCCGCTCGGTGGTATTATTGAAGCCGGATTTAATATCCGTGGCGTTATTCCGAATAATGAAGCGATAGTTTCTGTTGCCCAGAAAGTACTGGGTGTGGAAACCATGAGTATTTTATTACTCGGATTTATTTTTAACCTCGCAATTGCACGACTGACCAAATATAAATATATCTTTTTAACCGGGCATCACTCTTTCTTTTTAGCCTGCTTATTTTCTGCGGTATTACAGGCGGCGAGCTTTAAAGGCTGGGAAATGGTGCTTATCGGCGGTTTCCTGCTGGGTTCATGGTCTGCTATCTCTCCGGCTATCGGGCAGCGTTATACCAAACGGGTGACAGAAGACGGCGGAATAGCGATGGGACACTTCGGGTCGCTCGGCTATTACCTGTCAGCGTGGATTGCGGGCAAAGTCGGTAAAGCGGAAGACTCATTTGCCGATACTGAAATCTCAGAAAAATGGGGCTTCCTGCGCGATACCACAGTCACTACCGGTATTGTTATGGTCGTTATCTATCTGGTGTGCAGTATTGTGGCAGGCTCCGGCTATATCAGCACTATTACTGAACAAAACATGGTTATCTTCTCCATTATTACCGGTCTGCAATTTGCTGTCGGGGTGGCGATTGTCTACAGCGGTGTCCGCTTAATTTTGGGTGATTTGGTGCCTGCATTCCAGGGGATCAGCCAGAAGCTTATTCCGAATTCTATTCCGGCTGTTGACTGTGCGGTCTTCTTTACTTTCAGCCCGACAGCCGTGGTTATTGGTTTTATCAGCTCCTTTATCGGCGGACTGGTGGGTATGCTGATGCTCGGTGGTCTGGGTATGGCGCTGATTATCCCGGGCATGGTGCCGCATTTCTTCTGTGGTGGTACATCCGGTGTTTTCGCCGACAAACTGGGCGGGAAAAAGGGCTGTATTATTGCATCCTTTATTGGCGGTATTTTCCTGGCATTCTTACCGGCGATGTTATTACCGGCATTGGGTAATCTCGGTTTTGAAAATAGTACATTCGCAGACTTTGACTTTGCGGTCTGGGGTATTGTTATCGGAGAAGCATTTACTCACTTCGGACAAATTGCGATTTACCTGATTTGCTTTGTCTTATTGCTGGCGTTATTAATCCCGTTTGCCTTTAAATCAGTCAAAGTGGTTGGTGATACCCTCAGTTATGACGAATTAATCGAAAAAGACCGTGCACATAAATAAATATGATACTGACGAAAGGCATTAAGGAGTTGTTATGGCAGTAATTTCTG