Homologs in group_2326

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18100 FBDBKF_18100 85.9 Morganella morganii S1 ptsN Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
EHELCC_16800 EHELCC_16800 85.9 Morganella morganii S2 ptsN Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
NLDBIP_17650 NLDBIP_17650 85.9 Morganella morganii S4 ptsN Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
LHKJJB_17570 LHKJJB_17570 85.9 Morganella morganii S3 ptsN Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
HKOGLL_17385 HKOGLL_17385 85.9 Morganella morganii S5 ptsN Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
PMI_RS08715 PMI_RS08715 27.1 Proteus mirabilis HI4320 - PTS sugar transporter subunit IIA

Distribution of the homologs in the orthogroup group_2326

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2326

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8FAJ0 2.53e-18 79 33 1 119 3 ulaC Ascorbate-specific PTS system EIIA component Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P69820 1.08e-17 77 30 2 139 1 ulaC Ascorbate-specific PTS system EIIA component Escherichia coli (strain K12)
P69821 1.08e-17 77 30 2 139 3 ulaC Ascorbate-specific PTS system EIIA component Escherichia coli O157:H7
Q8ZK88 1.38e-17 77 33 1 115 3 ulaC Ascorbate-specific PTS system EIIA component Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q57GJ7 1.38e-17 77 33 1 115 3 ulaC Ascorbate-specific PTS system EIIA component Salmonella choleraesuis (strain SC-B67)
Q8Z170 6.7e-17 75 33 1 115 3 ulaC Ascorbate-specific PTS system EIIA component Salmonella typhi
Q3YUF3 8.39e-17 75 29 2 139 3 ulaC Ascorbate-specific PTS system EIIA component Shigella sonnei (strain Ss046)
Q31TC6 8.39e-17 75 29 2 139 3 ulaC Ascorbate-specific PTS system EIIA component Shigella boydii serotype 4 (strain Sb227)
Q5PJ64 8.76e-17 75 33 1 115 3 ulaC Ascorbate-specific PTS system EIIA component Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q83P28 1.11e-16 75 29 2 139 3 ulaC Ascorbate-specific PTS system EIIA component Shigella flexneri
Q328K2 1.81e-16 74 28 2 138 3 ulaC Ascorbate-specific PTS system EIIA component Shigella dysenteriae serotype 1 (strain Sd197)
P39363 2.51e-16 73 31 0 118 3 sgcA Putative phosphotransferase IIA component SgcA Escherichia coli (strain K12)
P69824 4.63e-11 60 31 1 113 1 cmtB Mannitol-specific cryptic phosphotransferase enzyme IIA component Escherichia coli (strain K12)
P69825 4.63e-11 60 31 1 113 3 cmtB Mannitol-specific cryptic phosphotransferase enzyme IIA component Escherichia coli O157:H7
Q02420 1.66e-08 53 30 2 116 3 mtlF Mannitol-specific phosphotransferase enzyme IIA component Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
P27547 2.01e-07 50 28 4 134 3 mtlF Mannitol-specific phosphotransferase enzyme IIA component Enterococcus faecalis (strain ATCC 700802 / V583)
P75292 0.00023 42 24 3 123 3 ulaC Ascorbate-specific PTS system EIIA component Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P17876 0.000792 40 26 4 139 1 mtlF Mannitol-specific phosphotransferase enzyme IIA component Staphylococcus carnosus (strain TM300)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10305
Feature type CDS
Gene -
Product PTS sugar transporter subunit IIA
Location 173308 - 173757 (strand: 1)
Length 450 (nucleotides) / 149 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2326
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1762 Carbohydrate transport and metabolism (G)
Signal transduction mechanisms (T)		 GT Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)

Protein Sequence

MEIYFDSKLLSLNQHFTSAEEGIRYAGGLLYQAGACNHDYIEEMIRVYHEFGSIIVLDTGVAMPHARPEKGALKTAFSVVVTGTPLVFHHEEFDPVNVIIAITATDPDTHIHLIQTVADLIENNITEFVKENNKEQILHFIRMSIERTV

Flanking regions ( +/- flanking 50bp)

ATATTTAGGTCATCTTTAAAAATAAGAAAAATCATATCAGGAGTGCGGTTTTGGAGATTTATTTCGACAGTAAGCTGTTATCCCTGAATCAGCATTTTACCTCAGCGGAGGAGGGAATACGTTACGCCGGAGGGCTGCTATATCAGGCCGGAGCCTGTAATCATGATTATATTGAGGAGATGATCCGCGTTTATCATGAATTTGGTTCGATTATTGTTCTGGATACCGGTGTGGCGATGCCACACGCAAGACCGGAAAAAGGCGCGTTAAAAACGGCATTTTCTGTTGTGGTAACCGGAACGCCGCTGGTGTTTCATCATGAAGAATTTGATCCGGTAAACGTTATTATTGCGATTACCGCAACGGACCCGGACACCCATATTCATCTGATTCAGACGGTGGCCGACCTTATTGAAAATAATATTACTGAATTTGTAAAAGAAAATAATAAAGAACAGATTTTACATTTTATCCGGATGTCGATAGAGAGGACAGTATGATTAAAATAAGAACCGTATGCGGCAATGGTATCGGTAGTTCATTAATGGCT