COG1762


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1762, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
Function(s) descr. Carbohydrate transport and metabolism (G)
Signal transduction mechanisms (T)

Occurence in the database

COG1762 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_737 FBDBKF_03260 52518 52985 1 ptsN PTS IIA-like nitrogen regulatory protein PtsN Morganella morganii S1
1 group_2326 FBDBKF_18100 22532 22981 1 ptsN Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Morganella morganii S1
2 group_737 EHELCC_07275 194118 194585 -1 ptsN PTS IIA-like nitrogen regulatory protein PtsN Morganella morganii S2
3 group_2326 EHELCC_16800 22532 22981 1 ptsN Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Morganella morganii S2
4 group_737 NLDBIP_07600 193991 194458 -1 ptsN PTS IIA-like nitrogen regulatory protein PtsN Morganella morganii S4
5 group_2326 NLDBIP_17650 32785 33234 -1 ptsN Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Morganella morganii S4
6 group_737 LHKJJB_07135 157737 158204 -1 ptsN PTS IIA-like nitrogen regulatory protein PtsN Morganella morganii S3
7 group_2326 LHKJJB_17570 32785 33234 -1 ptsN Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Morganella morganii S3
8 group_737 HKOGLL_03795 75183 75650 1 ptsN PTS IIA-like nitrogen regulatory protein PtsN Morganella morganii S5
9 group_2326 HKOGLL_17385 32785 33234 -1 ptsN Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Morganella morganii S5
10 group_2326 F4V73_RS10305 173308 173757 1 PTS sugar transporter subunit IIA Morganella psychrotolerans
11 group_737 F4V73_RS11660 483659 484126 -1 ptsN PTS IIA-like nitrogen regulatory protein PtsN Morganella psychrotolerans
12 group_2326 PMI_RS08715 1908072 1908515 -1 PTS sugar transporter subunit IIA Proteus mirabilis HI4320
13 group_737 PMI_RS18140 3984352 3984819 -1 ptsN PTS IIA-like nitrogen regulatory protein PtsN Proteus mirabilis HI4320