Homologs in group_30

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14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02780 FBDBKF_02780 40.8 Morganella morganii S1 lysR DNA-binding transcriptional regulator, LysR family
EHELCC_03250 EHELCC_03250 40.8 Morganella morganii S2 lysR DNA-binding transcriptional regulator, LysR family
NLDBIP_00210 NLDBIP_00210 40.8 Morganella morganii S4 lysR DNA-binding transcriptional regulator, LysR family
LHKJJB_01825 LHKJJB_01825 40.8 Morganella morganii S3 lysR DNA-binding transcriptional regulator, LysR family
HKOGLL_01865 HKOGLL_01865 40.8 Morganella morganii S5 lysR DNA-binding transcriptional regulator, LysR family
F4V73_RS01700 F4V73_RS01700 16.8 Morganella psychrotolerans - LysR family transcriptional regulator
F4V73_RS03270 F4V73_RS03270 26.0 Morganella psychrotolerans - LysR family transcriptional regulator
F4V73_RS04355 F4V73_RS04355 28.7 Morganella psychrotolerans - LysR family transcriptional regulator
F4V73_RS05245 F4V73_RS05245 40.5 Morganella psychrotolerans - LysR substrate-binding domain-containing protein
F4V73_RS05520 F4V73_RS05520 26.9 Morganella psychrotolerans - LysR family transcriptional regulator
F4V73_RS06440 F4V73_RS06440 18.3 Morganella psychrotolerans - LysR substrate-binding domain-containing protein
F4V73_RS13185 F4V73_RS13185 28.7 Morganella psychrotolerans - LysR family transcriptional regulator
F4V73_RS13375 F4V73_RS13375 22.4 Morganella psychrotolerans - LysR family transcriptional regulator
PMI_RS03935 PMI_RS03935 68.4 Proteus mirabilis HI4320 yafC DNA-binding transcriptional regulator YafC

Distribution of the homologs in the orthogroup group_30

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_30

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P30864 4.05e-140 400 64 0 293 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
Q9JPU9 8.38e-112 328 55 0 295 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup C (strain 8013)
Q9JXW7 6.6e-110 323 54 0 295 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
A0A0H2ZDG9 1.32e-44 157 33 3 287 3 PA14_22550 HTH-type transcriptional repressor PA14_22550 Pseudomonas aeruginosa (strain UCBPP-PA14)
P76250 4.11e-41 147 32 3 288 1 dmlR HTH-type transcriptional regulator DmlR Escherichia coli (strain K12)
P67662 7.49e-41 147 34 4 292 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli (strain K12)
P67663 7.49e-41 147 34 4 292 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P67664 7.49e-41 147 34 4 292 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O157:H7
P43011 1.34e-36 135 31 3 273 3 HI_1364 Uncharacterized HTH-type transcriptional regulator HI_1364 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P37641 1.25e-35 133 32 4 295 3 yhjC Uncharacterized HTH-type transcriptional regulator YhjC Escherichia coli (strain K12)
P75836 3.54e-32 124 27 5 290 3 ycaN Uncharacterized HTH-type transcriptional regulator YcaN Escherichia coli (strain K12)
P72131 3.06e-30 119 32 4 287 1 ptxR HTH-type transcriptional regulator PtxR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P45463 3.3e-29 116 26 3 290 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain K12)
Q8XBK9 4.23e-29 115 26 3 290 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O157:H7
Q1R6S1 4.79e-29 115 26 3 290 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain UTI89 / UPEC)
Q8FDH0 4.79e-29 115 26 3 290 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TD46 8.04e-29 115 26 3 290 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P77333 7.99e-27 109 28 6 286 1 pgrR HTH-type transcriptional regulator PgrR Escherichia coli (strain K12)
P0A9F6 6.41e-25 104 31 5 256 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 6.41e-25 104 31 5 256 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 6.41e-25 104 31 5 256 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
Q01610 3.18e-24 102 29 7 272 3 PA2220 Putative transcriptional regulator Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P52689 1.31e-23 101 23 2 284 3 ltrA Probable HTH-type transcriptional regulator LtrA Klebsiella pneumoniae
P45099 1.21e-21 95 27 7 282 3 gcvA Glycine cleavage system transcriptional activator homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P46068 2.62e-17 84 26 5 261 2 dsdC HTH-type transcriptional regulator DsdC Escherichia coli (strain K12)
P24734 1.54e-16 81 32 4 203 1 ampR HTH-type transcriptional activator AmpR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P96725 2.63e-16 80 26 8 287 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
Q8X4M5 2.83e-16 80 37 4 138 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
P27111 4.72e-16 80 36 5 163 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
P39647 1.33e-15 79 27 6 239 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
P70785 1.7e-15 78 26 6 273 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
O68014 1.08e-14 76 30 2 156 1 benM HTH-type transcriptional regulator BenM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P39376 1.89e-14 75 24 9 283 1 yjiE HTH-type transcriptional regulator YjiE Escherichia coli (strain K12)
P25544 2.43e-14 75 25 4 244 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
P07774 3.55e-14 74 24 7 266 1 catM HTH-type transcriptional regulator CatM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
A0T0G2 4.97e-14 74 23 4 257 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
P12529 7.09e-14 73 28 1 174 1 ampR HTH-type transcriptional activator AmpR Citrobacter freundii
P37459 1.34e-13 73 29 2 182 3 sinR Probable HTH-type transcriptional regulator SinR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q04778 1.41e-13 73 29 6 199 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
P0ACR4 1.44e-13 73 23 8 307 1 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli (strain K12)
P0ACR5 1.44e-13 73 23 8 307 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACR6 1.44e-13 73 23 8 307 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O157:H7
P52669 1.57e-13 73 29 1 140 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P33634 1.87e-13 72 25 8 295 3 yfiE Uncharacterized HTH-type transcriptional regulator YfiE Escherichia coli (strain K12)
P20668 2.16e-13 72 24 3 238 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
P0ACR8 3.15e-13 72 37 2 124 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 3.15e-13 72 37 2 124 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
P52660 3.46e-13 72 31 1 140 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
P42722 4.83e-13 71 25 6 280 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P52658 6.16e-13 71 27 2 194 3 ampR HTH-type transcriptional activator AmpR Citrobacter koseri
P14145 6.17e-13 71 27 3 247 3 ampR HTH-type transcriptional activator AmpR Rhodobacter capsulatus
A0T0V5 8.14e-13 70 25 3 208 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
P52676 8.22e-13 70 29 2 194 3 nmcR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Enterobacter cloacae
Q06610 1.86e-12 70 26 9 297 3 rbcR RuBisCO operon transcriptional regulator Acidithiobacillus ferrooxidans
Q57083 2.8e-12 69 30 2 183 1 perR HTH-type transcriptional regulator PerR Escherichia coli (strain K12)
P39592 3.96e-12 68 33 2 118 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
O34685 5e-12 68 31 2 154 1 yofA HTH-type transcriptional regulator YofA Bacillus subtilis (strain 168)
Q9X5P2 8.62e-12 68 34 0 123 2 oxyR Probable hydrogen peroxide-inducible genes activator Streptomyces viridosporus
A2CI69 9.82e-12 67 32 2 149 3 rbcR Probable RuBisCO transcriptional regulator Chlorokybus atmophyticus
Q8KA72 1e-11 67 24 7 240 3 metR HTH-type transcriptional regulator MetR Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P55576 1.04e-11 67 25 8 296 3 NGR_a02420 Uncharacterized HTH-type transcriptional regulator y4mQ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P77744 1.16e-11 67 27 2 143 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
P73123 1.26e-11 67 30 1 149 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9X725 1.42e-11 67 24 2 245 3 oxyR Hydrogen peroxide-inducible genes activator Dickeya chrysanthemi
P52683 1.49e-11 67 25 2 202 3 smeR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Serratia marcescens
P52686 1.51e-11 67 30 1 136 3 sdsB SDS degradation transcriptional activation protein Pseudomonas sp. (strain ATCC 19151)
P42507 1.61e-11 67 28 3 167 3 hvrB AhcY transcriptional activator HvrB Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P71025 1.62e-11 67 27 3 168 3 czcR HTH-type transcriptional regulator CzcR Bacillus subtilis (strain 168)
Q8YQ82 2.29e-11 67 30 1 149 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Q3MCB5 2.37e-11 67 30 1 149 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
P52595 2.49e-11 66 28 7 240 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
Q57748 3.23e-11 66 31 2 138 3 MJ0300 Uncharacterized HTH-type transcriptional regulator MJ0300 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P71318 4.8e-11 65 24 1 237 3 oxyR Hydrogen peroxide-inducible genes activator Pectobacterium carotovorum subsp. carotovorum
Q85G62 6.29e-11 65 29 1 147 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
O33945 6.72e-11 65 28 4 168 3 None Probable cat1 operon transcriptional activator Acinetobacter lwoffii
P94403 6.77e-11 65 29 4 142 3 bsdA HTH-type transcriptional regulator BsdA Bacillus subtilis (strain 168)
P0C6D1 7.61e-11 65 25 8 294 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F9F9 7.76e-11 65 25 8 294 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P52696 2.51e-10 63 26 1 157 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
P77559 2.83e-10 63 30 3 146 3 ynfL Uncharacterized HTH-type transcriptional regulator YnfL Escherichia coli (strain K12)
P77700 2.85e-10 63 25 7 260 1 yahB Uncharacterized HTH-type transcriptional regulator YahB Escherichia coli (strain K12)
P44418 3.44e-10 63 24 5 247 3 oxyR Hydrogen peroxide-inducible genes activator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P05051 4.99e-10 62 28 2 183 3 ampR HTH-type transcriptional activator AmpR Enterobacter cloacae
Q55459 5.06e-10 62 27 9 295 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P52691 5.5e-10 62 32 1 139 3 lrrA Probable HTH-type transcriptional regulator LrrA Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P52661 6.45e-10 62 29 3 147 1 gbpR HTH-type transcriptional regulator GbpR Azospirillum brasilense
P44821 6.67e-10 62 28 2 139 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O34701 1.1e-09 61 27 8 247 3 yoaU Uncharacterized HTH-type transcriptional regulator YoaU Bacillus subtilis (strain 168)
P37499 1.12e-09 61 27 1 133 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
O32186 2.67e-09 60 24 10 308 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
P0ACR2 3.51e-09 60 32 2 137 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli (strain K12)
P0ACR3 3.51e-09 60 32 2 137 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli O157:H7
P48271 3.8e-09 60 27 1 147 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
Q44311 3.87e-09 60 31 5 148 3 soxR HTH-type transcriptional regulator SoxR Arthrobacter sp. (strain TE1826)
P0ACQ4 4.27e-09 60 27 1 139 1 oxyR DNA-binding transcriptional dual regulator OxyR Escherichia coli (strain K12)
P0ACQ5 4.27e-09 60 27 1 139 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACQ6 4.27e-09 60 27 1 139 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O157:H7
Q47141 4.4e-09 60 31 3 149 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
A4QH19 4.42e-09 60 26 2 153 1 shiR HTH-type transcriptional regulator ShiR Corynebacterium glutamicum (strain R)
Q6B936 4.97e-09 59 28 3 163 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
O19892 8.61e-09 59 29 1 146 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
Q1XDT2 9.8e-09 58 28 2 149 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
Q9S4Y7 1.01e-08 58 40 0 79 3 allS HTH-type transcriptional activator AllS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PCH2 1.01e-08 58 40 0 79 3 allS HTH-type transcriptional activator AllS Salmonella paratyphi A (strain ATCC 9150 / SARB42)
O35038 1.08e-08 58 27 1 118 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
Q6HPH4 1.17e-08 58 29 3 144 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis subsp. konkukian (strain 97-27)
Q81IX0 1.18e-08 58 29 3 144 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q57S50 1.22e-08 58 40 0 79 3 allS HTH-type transcriptional activator AllS Salmonella choleraesuis (strain SC-B67)
Q81VJ1 1.26e-08 58 29 3 144 3 czcR HTH-type transcriptional regulator CzcR Bacillus anthracis
Q63H01 1.33e-08 58 29 3 144 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ZK / E33L)
Q73EY2 1.33e-08 58 29 3 144 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 10987 / NRS 248)
P49518 1.35e-08 58 26 2 149 3 rbcR Probable RuBisCO transcriptional regulator Trieres chinensis
P37682 1.41e-08 58 24 7 257 3 yiaU Uncharacterized HTH-type transcriptional regulator YiaU Escherichia coli (strain K12)
P52693 1.43e-08 58 31 2 142 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
A0R8S0 1.52e-08 58 29 3 144 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis (strain Al Hakam)
P0ACR0 1.65e-08 58 40 0 79 1 allS HTH-type transcriptional activator AllS Escherichia coli (strain K12)
P0ACR1 1.65e-08 58 40 0 79 3 allS HTH-type transcriptional activator AllS Escherichia coli O157:H7
P51205 1.72e-08 58 28 2 149 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
Q5N5I5 2.27e-08 58 24 9 297 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 2.27e-08 58 24 9 297 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
Q8Z8R3 2.43e-08 57 40 0 79 3 allS HTH-type transcriptional activator AllS Salmonella typhi
O78432 2.55e-08 57 25 2 163 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
Q8FK66 2.79e-08 57 40 0 79 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TKD7 2.79e-08 57 40 0 79 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P94501 3.56e-08 57 30 2 126 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
Q1RF30 4e-08 57 40 0 79 3 allS HTH-type transcriptional activator AllS Escherichia coli (strain UTI89 / UPEC)
A1A8H0 4e-08 57 40 0 79 3 allS HTH-type transcriptional activator AllS Escherichia coli O1:K1 / APEC
O32255 4.56e-08 57 27 3 147 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
P39127 4.62e-08 57 21 9 291 3 citR HTH-type transcriptional regulator CitR Bacillus subtilis (strain 168)
P94387 5.41e-08 57 28 3 121 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
P52678 7.19e-08 56 27 1 141 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium leprae (strain TN)
P52666 7.23e-08 56 28 3 140 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
P0A9G1 7.52e-08 56 24 6 232 3 metR HTH-type transcriptional regulator MetR Shigella flexneri
P0A9F9 7.52e-08 56 24 6 232 1 metR HTH-type transcriptional regulator MetR Escherichia coli (strain K12)
P0A9G0 7.52e-08 56 24 6 232 3 metR HTH-type transcriptional regulator MetR Escherichia coli O157:H7
O07906 7.81e-08 56 21 5 280 3 yraN Uncharacterized HTH-type transcriptional regulator YraN Bacillus subtilis (strain 168)
P0A4T7 9.05e-08 56 27 6 175 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 9.05e-08 56 27 6 175 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
P52665 9.73e-08 53 30 1 111 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
A7Z5E4 1.02e-07 55 32 4 131 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
Q9HWH8 1.05e-07 55 26 3 161 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0ACQ9 1.14e-07 55 28 5 167 3 tdcA HTH-type transcriptional regulator TdcA Shigella flexneri
P0ACQ7 1.14e-07 55 28 5 167 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli (strain K12)
P0ACQ8 1.14e-07 55 28 5 167 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli O157:H7
O06703 1.35e-07 55 30 3 132 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P77171 1.42e-07 55 25 3 169 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
P0A2Q4 1.5e-07 55 24 7 241 3 metR HTH-type transcriptional regulator MetR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q5 1.5e-07 55 24 7 241 3 metR HTH-type transcriptional regulator MetR Salmonella typhi
Q4G384 1.56e-07 55 28 1 149 3 rbcR Probable RuBisCO transcriptional regulator Emiliania huxleyi
P55181 3.52e-07 54 28 2 118 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
O87883 4.25e-07 52 26 1 156 3 oxyR Probable hydrogen peroxide-inducible genes activator (Fragment) Mycobacterium xenopi
P96194 4.66e-07 52 32 0 99 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
Q1R4H3 5.54e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
P59369 5.54e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 5.54e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 5.54e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 5.54e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
B7LUJ5 5.96e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B7NF72 6.07e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q329U3 6.19e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
B6I4A0 6.19e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
B7M5B2 6.19e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B7NU32 6.19e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5YY14 6.19e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 6.19e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 6.19e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
A7ZTW7 6.19e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
Q3YVK2 6.25e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 6.25e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 6.25e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q31UM0 6.25e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 6.25e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
P0A8R9 6.25e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 6.25e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 6.25e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 6.25e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 6.25e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7UMM1 6.25e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
P52044 6.51e-07 53 27 1 102 3 ygfI Uncharacterized HTH-type transcriptional regulator YgfI Escherichia coli (strain K12)
O69772 7.06e-07 53 27 3 206 3 ampR HTH-type transcriptional activator AmpR Providencia stuartii
B4SYF7 7.4e-07 53 28 4 146 3 hdfR HTH-type transcriptional regulator HdfR Salmonella newport (strain SL254)
B2TU26 8.01e-07 53 37 0 80 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q05840 8.18e-07 53 30 0 98 3 clcR HTH-type transcriptional regulator ClcR Pseudomonas putida
B5FN59 8.5e-07 53 28 4 146 3 hdfR HTH-type transcriptional regulator HdfR Salmonella dublin (strain CT_02021853)
P0A2Q0 8.9e-07 52 28 4 146 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q1 8.9e-07 52 28 4 146 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhi
B5BIR0 8.9e-07 52 28 4 146 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain AKU_12601)
C0Q2U0 8.9e-07 52 28 4 146 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi C (strain RKS4594)
A9MXD5 8.9e-07 52 28 4 146 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJZ0 8.9e-07 52 28 4 146 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TAZ8 8.9e-07 52 28 4 146 3 hdfR HTH-type transcriptional regulator HdfR Salmonella heidelberg (strain SL476)
B5EZ22 8.9e-07 52 28 4 146 3 hdfR HTH-type transcriptional regulator HdfR Salmonella agona (strain SL483)
B4TNR5 9.41e-07 52 28 4 146 3 hdfR HTH-type transcriptional regulator HdfR Salmonella schwarzengrund (strain CVM19633)
P45349 1.5e-06 52 24 7 264 3 metR HTH-type transcriptional regulator MetR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P45461 1.64e-06 52 27 1 139 3 ampR HTH-type transcriptional activator AmpR Yersinia enterocolitica
A1JI47 2.76e-06 51 23 9 292 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
O87324 2.89e-06 51 25 3 166 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium marinum
P25547 3.03e-06 51 29 1 116 3 gbpR HTH-type transcriptional regulator GbpR Rhizobium radiobacter
P35112 3.7e-06 51 26 2 148 3 nocR Regulatory protein NocR Agrobacterium tumefaciens (strain T37)
Q00678 3.74e-06 51 26 2 148 3 nocR Regulatory protein NocR Agrobacterium fabrum (strain C58 / ATCC 33970)
Q765S2 4.39e-06 50 35 0 79 3 allS HTH-type transcriptional activator AllS Klebsiella pneumoniae
P11720 7.27e-06 50 28 3 132 1 trpI HTH-type transcriptional regulator TrpI Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
B1JQ39 8.04e-06 50 27 2 143 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 8.04e-06 50 27 2 143 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 8.04e-06 50 27 2 143 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 8.04e-06 50 27 2 143 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 8.04e-06 50 27 2 143 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 8.04e-06 50 27 2 143 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 8.04e-06 50 27 2 143 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 8.04e-06 50 27 2 143 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 8.04e-06 50 27 2 143 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
O34827 8.73e-06 50 23 1 145 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
B4E8V9 1.48e-05 49 24 4 182 1 cysB HTH-type transcriptional regulator CysB Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
P34818 2.18e-05 48 26 2 129 3 trpI HTH-type transcriptional regulator TrpI Pseudomonas syringae pv. syringae
O33812 2.29e-05 48 22 10 287 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
P52685 3.41e-05 48 24 5 243 3 mauR Mau operon transcriptional activator Paracoccus denitrificans
P0DUU5 3.88e-05 48 25 0 129 1 aceR HTH-type transcriptional regulator AceR Acinetobacter baumannii (strain ATCC 17978 / DSM 105126 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
P45105 4e-05 48 25 6 196 3 cysB HTH-type transcriptional regulator CysB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0DV33 4.28e-05 48 23 2 153 1 admX HTH-type transcriptional regulator AdmX Serratia plymuthica
Q9KPI4 6.54e-05 47 27 3 140 3 VC_2383 Uncharacterized HTH-type transcriptional regulator VC_2383 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q8X487 0.000112 46 23 9 233 1 qseD HTH domain-truncated transcriptional regulator QseD Escherichia coli O157:H7
O52399 0.000121 46 35 2 88 3 argP HTH-type transcriptional regulator ArgP Edwardsiella ictaluri (strain 93-146)
P25545 0.000189 46 23 7 266 3 cbbR HTH-type transcriptional regulator CbbR Xanthobacter flavus
P33651 0.000372 45 30 0 83 3 blaA HTH-type transcriptional regulator BlaA Streptomyces cacaoi
O69055 0.000388 44 30 2 104 3 ptxE Putative HTH-type transcriptional regulator protein PtxE (Fragment) Stutzerimonas stutzeri
P67660 0.000511 44 24 7 257 1 yhaJ Probable HTH-type transcriptional regulator YhaJ Escherichia coli (strain K12)
P67661 0.000511 44 24 7 257 1 yhaJ HTH-type transcriptional regulator YhaJ Escherichia coli O157:H7
P23841 0.000616 44 33 0 66 3 xapR HTH-type transcriptional regulator XapR Escherichia coli (strain K12)
Q46M57 0.000665 44 23 0 118 1 tfdR HTH-type transcriptional regulator TdfR Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
Q46M54 0.000689 44 23 0 118 1 tfdS HTH-type transcriptional regulator TfdS Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
P20667 0.000726 44 26 5 180 3 catR HTH-type transcriptional regulator CatR Pseudomonas putida

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10230
Feature type CDS
Gene -
Product LysR family transcriptional regulator
Location 156332 - 157231 (strand: 1)
Length 900 (nucleotides) / 299 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_30
Orthogroup size 15
N. genomes 7

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Protein Sequence

MKATSEEARVFIEVVEHKSFTKAADKLNLANSAVSRTVKKLEEKLGVNLLNRTTRQIDLTAEGELYFQRMKGILQEMQATENELLGSQSSPKGVLRIDAATPVVLHLLIPFISVFRRQYPDIVLSLVSSETFVNLIERKVDIAIRAGQLTDSSLRARLLFNSYRKVVASPRYIETAGKPSSVADLYHHTCLTFTEPASLNTWPLNTEDGRLINVADGISSNNGETLRQLCASGEGIACLSDFMVNEGIESGEFTELLSDELQPVPLPFHAVYYSDRVVSRRIRVFIDSLTHYLAHIQKP

Flanking regions ( +/- flanking 50bp)

TCAGAATATGGCATATCAGTCAGGCGGCGGGGAATATAAAGGAATCGTGTATGAAGGCAACATCGGAAGAAGCTCGTGTATTTATTGAAGTCGTTGAGCACAAAAGTTTTACTAAAGCCGCAGATAAACTGAATCTGGCGAATTCTGCCGTCAGCCGTACTGTTAAAAAACTGGAAGAGAAACTTGGCGTTAATTTGCTCAACCGGACAACCCGGCAGATTGATCTGACGGCAGAAGGTGAACTTTATTTTCAGCGGATGAAAGGTATCCTGCAGGAAATGCAGGCCACAGAAAATGAACTGCTCGGTTCACAGAGTTCGCCGAAAGGTGTATTACGGATTGATGCGGCAACCCCGGTTGTCCTGCATCTGCTTATTCCGTTTATTTCGGTATTCCGCCGTCAATATCCGGATATTGTATTATCACTGGTTTCATCCGAAACCTTCGTTAATCTGATTGAGCGTAAAGTTGATATCGCGATACGGGCAGGGCAACTGACAGATTCCAGTCTGCGCGCGCGTCTGTTATTTAACAGTTACCGGAAAGTCGTGGCATCTCCCCGTTATATTGAAACTGCTGGTAAACCCTCCTCAGTGGCTGATTTATATCATCACACCTGCCTGACATTTACTGAACCGGCATCACTGAATACCTGGCCGCTGAATACAGAAGACGGCCGGCTGATTAATGTTGCGGACGGAATCTCTTCGAACAACGGGGAAACATTACGGCAGTTATGCGCCAGTGGGGAAGGTATCGCGTGTCTGTCTGATTTTATGGTGAATGAAGGGATTGAGAGCGGGGAGTTTACTGAATTGCTCAGTGATGAACTGCAGCCGGTTCCGCTGCCGTTTCATGCGGTTTATTACAGTGACAGAGTGGTCAGCCGGCGAATCCGGGTCTTCATCGATAGTCTGACGCACTATCTGGCACACATTCAGAAGCCATAATTATTGATGACTTCTGAATTCAACACAGGATTAATCCCATTCAGGAGCCA