Homologs in group_415

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18070 FBDBKF_18070 85.8 Morganella morganii S1 dcm DNA-cytosine methylase
EHELCC_16770 EHELCC_16770 85.8 Morganella morganii S2 dcm DNA-cytosine methylase
NLDBIP_17680 NLDBIP_17680 85.8 Morganella morganii S4 dcm DNA-cytosine methylase
LHKJJB_17600 LHKJJB_17600 85.8 Morganella morganii S3 dcm DNA-cytosine methylase
HKOGLL_17415 HKOGLL_17415 85.8 Morganella morganii S5 dcm DNA-cytosine methylase
F4V73_RS02270 F4V73_RS02270 30.4 Morganella psychrotolerans - DNA cytosine methyltransferase
F4V73_RS10160 F4V73_RS10160 48.2 Morganella psychrotolerans - DNA cytosine methyltransferase

Distribution of the homologs in the orthogroup group_415

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_415

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P34877 1.66e-132 387 56 9 367 3 scrFIAM Type II methyltransferase M1.ScrFI Lactococcus lactis subsp. cremoris
P34879 2.3e-127 374 53 7 362 3 ssoIIM Type II methyltransferase M.SsoII Shigella sonnei
P50185 2.56e-124 365 51 6 345 3 dsaVm Type II methyltransferase M.DsaV Dactylococcopsis salina
P24581 3.3e-117 345 53 7 350 3 nlaXM Type II methyltransferase M.NlaX Neisseria lactamica
P15446 6.6e-80 251 41 10 360 1 hpaIIM Type II methyltransferase M.HpaII Haemophilus parainfluenzae
P05101 1.15e-67 224 38 15 403 1 ecoRIIM Type II methyltransferase M.EcoRII Escherichia coli
P17044 1.26e-67 221 39 8 354 1 hsdFM Type II methyltransferase M.BsuFI Bacillus subtilis
O30868 2.1e-67 218 41 8 346 3 haeIIM Type II methyltransferase M.HaeII Haemophilus aegyptius
P05102 2.27e-67 218 37 8 346 1 hhaIM Type II methyltransferase M.HhaI Haemophilus parahaemolyticus
Q59603 4.14e-67 217 39 6 346 3 ngoBIM Type II methyltransferase M.NgoBI Neisseria gonorrhoeae
P11408 6.31e-66 218 38 8 349 3 mspIM Type II methyltransferase M.MspI Moraxella sp.
P0AED9 2.46e-63 212 39 13 397 1 dcm DNA-cytosine methyltransferase Escherichia coli (strain K12)
P0AEE0 2.46e-63 212 39 13 397 3 dcm DNA-cytosine methyltransferase Escherichia coli O157:H7
P43420 1.03e-57 193 36 11 350 3 bsp6IM Type II methyltransferase M.Bsp6I Bacillus sp. (strain RFL6)
P50182 4.88e-47 168 45 7 227 3 nlaIVM Type II methyltransferase M.NlaIV Neisseria lactamica
P19888 9.82e-47 167 47 3 187 1 banIM Type II methyltransferase M.BanI Aneurinibacillus aneurinilyticus
P19888 4.4e-08 58 45 2 64 1 banIM Type II methyltransferase M.BanI Aneurinibacillus aneurinilyticus
P25263 3.45e-46 166 49 5 191 1 hgiCIM Type II methyltransferase M.HgiCI Herpetosiphon aurantiacus
P25263 8.54e-05 48 43 1 58 1 hgiCIM Type II methyltransferase M.HgiCI Herpetosiphon aurantiacus
Q59605 6.79e-46 165 44 7 227 3 ngoBVM Type II methyltransferase M.NgoBV Neisseria gonorrhoeae
P20589 2.39e-35 135 29 9 364 1 haeIIIM Type II methyltransferase M.HaeIII Haemophilus aegyptius
P34906 9e-35 134 31 10 354 3 fnuDIM Type II methyltransferase M.FnuDI Fusobacterium nucleatum
P50196 8.98e-34 132 31 11 364 3 eco47IIM Type II methyltransferase M.Eco47II Escherichia coli
P25266 1.21e-33 132 39 5 217 3 hgiEIM Type II methylase M.HgiEI Herpetosiphon aurantiacus
P25262 8.31e-33 130 38 5 217 3 hgiBIM Type II methyltransferase M.HgiBI Herpetosiphon aurantiacus
P25264 3.57e-31 125 34 6 238 3 hgiCIIM Type II methyltransferase M.HgiCII Herpetosiphon aurantiacus
O33481 8.56e-31 124 30 10 375 3 pspPIM Type II methyltransferase M.PspPI Psychrobacter sp. (strain TA137)
Q59606 2.99e-30 122 29 12 356 3 ngoFVIIM Type II methyltransferase M.NgoFVII Neisseria gonorrhoeae
P00476 5.35e-30 122 38 5 185 3 None Orphan methyltransferase M.SPRI Bacillus phage SPR
P34882 5.43e-30 118 35 8 236 1 aquIMA Type II methyltransferase M.AquIA Picosynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)
P09915 1.36e-29 122 38 4 184 3 None Orphan methyltransferase M.Rho11sI Bacillus phage rho11s
P08455 4.19e-28 115 26 9 378 3 ngoPIIM Type II methyltransferase M.NgoPII Neisseria gonorrhoeae
P50192 5.58e-27 113 29 14 366 3 hphIAM Type II methyltransferase M1.HphI Haemophilus parahaemolyticus
P29567 8.69e-27 112 27 8 361 1 mthTIM Type II methyltransferase M.MthTI Methanothermobacter thermautotrophicus
P31974 9.79e-24 105 36 5 198 3 aluIM Type II methyltransferase M.AluI Cellulosimicrobium cellulans
P34878 8.06e-22 98 27 11 312 3 scrFIBM Type II methyltransferase M2.ScrFI Lactococcus lactis subsp. cremoris
P10283 4.99e-21 97 28 9 317 1 bepIM Type II methyltransferase M.BepI Brevibacterium epidermidis
P52311 4.94e-20 94 25 14 402 3 xorIIM Type II methyltransferase M.XorII Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85)
P23737 8.43e-20 93 38 1 122 1 sau96IM Type II methyltransferase M.Sau96I Staphylococcus aureus
D4ZX35 4.01e-19 90 26 12 363 1 aplIM Type II methyltransferase M.AplI Arthrospira platensis (strain NIES-39 / UTEX 3086 / IAM M-135)
P68586 5.54e-19 91 29 5 218 3 mtbP Orphan methyltransferase M.Phi3TI Bacillus phage phi3T
P68585 5.54e-19 91 29 5 218 3 mtbP Putative type II methyltransferase M.BsuMIIP Bacillus subtilis (strain 168)
P09389 5.54e-19 91 29 5 218 3 mtbP Orphan methyltransferase M.SPBetaI Bacillus phage SPbeta
P31033 3.11e-18 87 26 12 358 3 ngoMIVM Type II methyltransferase M.NgoMIV Neisseria gonorrhoeae
P09795 6.68e-17 85 25 15 380 3 sinIM Type II methyltransferase M.SinI Salmonella infantis
P50188 8.17e-17 84 23 10 366 3 naeIM Type II methyltransferase M.NaeI Lentzea aerocolonigenes
P94147 2.64e-16 83 29 6 227 3 ageIM Type II methyltransferase M.AgeI Thalassovita gelatinovora
P06530 8.27e-16 82 25 14 382 1 hsdRM Type II methyltransferase M.BsuRI Bacillus subtilis
P05302 8.95e-16 81 25 17 397 1 ddeIM Type II methyltransferase M.DdeI Desulfomicrobium norvegicum (strain DSM 1741 / NCIMB 8310)
P13906 1.63e-14 77 28 11 238 1 bspRIM Type II methyltransferase M.BspRI Lysinibacillus sphaericus
P16668 3.48e-14 77 29 7 202 3 sau3AIM Type II methyltransferase M.Sau3AI Staphylococcus aureus
O34680 1.2e-13 75 23 10 365 1 ydiP Type II methyltransferase M2.BsuMI Bacillus subtilis (strain 168)
O52702 1.02e-12 72 30 6 194 1 apaLIM Type II methyltransferase M.ApaLI Acetobacter pasteurianus
P34905 1.55e-12 71 24 13 362 3 bbvIM Type II methyltransferase M.BbvI Brevibacillus brevis
P0DW08 2.56e-12 71 24 12 337 1 drmMII Type II methyltransferase M.Bpa9945I Bacillus paralicheniformis (strain ATCC 9945a / NCIMB 11709 / CD-2)
Q8EL95 5.24e-12 70 26 6 238 3 OB3336 Putative type II methyltransferase M.OihORF3336P Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
Q9YDP3 6.77e-12 70 28 11 253 1 APE_0872.1 DNA (cytosine-5-)-methyltransferase M.ApeKI Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
P36216 1.23e-11 68 26 7 227 3 CVIJIM Type II methyltransferase M.CviJI Paramecium bursaria Chlorella virus IL3A
P15840 3.96e-11 67 26 14 313 1 sssIM Orphan methyltransferase M.SssI Spiroplasma monobiae (strain ATCC 33825 / MQ-1)
P25265 4.93e-11 67 22 13 375 3 hgiDIIM Type II methylase M.HgiDII Herpetosiphon aurantiacus
P24600 2.04e-10 64 26 17 354 3 hgiDIM Type II methyltransferase M.HgiDI Herpetosiphon aurantiacus
P45000 3.91e-09 60 27 9 191 3 hindVM Type II methyltransferase M.HindV Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q71TL0 6.91e-09 61 22 8 326 1 dmt DNA N-6-adenine-methyltransferase Escherichia phage P1
O31073 9.47e-09 60 23 16 395 3 sacIM Type II methyltransferase M.SacI Streptomyces achromogenes
A0A2H1VE33 1.24e-08 59 23 12 353 1 TRDMT1 tRNA (cytosine(38)-C(5))-methyltransferase Spodoptera frugiperda
B1Q3J6 1.55e-07 57 25 9 227 2 MET1B DNA (cytosine-5)-methyltransferase 1B Oryza sativa subsp. japonica
O23273 2.14e-07 56 24 11 283 1 MET4 DNA (cytosine-5)-methyltransferase 4 Arabidopsis thaliana
Q9RLM4 3.78e-07 55 22 16 396 3 nmeDIMP Type II methyltransferase M.NmeDI Neisseria meningitidis serogroup C
Q9M0S8 3.82e-07 55 23 8 272 2 MET2 DNA (cytosine-5)-methyltransferase 2 Arabidopsis thaliana
F4JWT7 7.28e-07 54 24 6 186 1 DNMT2 tRNA (cytosine(38)-C(5))-methyltransferase 2 Arabidopsis thaliana
P34881 1.06e-06 54 25 9 228 1 DMT1 DNA (cytosine-5)-methyltransferase 1 Arabidopsis thaliana
P13864 1.14e-06 54 23 7 222 1 Dnmt1 DNA (cytosine-5)-methyltransferase 1 Mus musculus
Q24K09 1.33e-06 54 23 7 222 1 DNMT1 DNA (cytosine-5)-methyltransferase 1 Bos taurus
P25267 1.61e-06 50 33 4 118 3 hgiGIM Type II methyltransferase M.HgiGI (Fragment) Herpetosiphon aurantiacus
Q27746 1.96e-06 53 24 8 225 2 DNMT DNA (cytosine-5)-methyltransferase PliMCI Paracentrotus lividus
Q7Y1I7 3.38e-06 53 25 6 185 2 MET1A DNA (cytosine-5)-methyltransferase 1A Oryza sativa subsp. japonica
Q9T0I1 8.35e-06 51 29 5 147 3 MET3 DNA (cytosine-5)-methyltransferase 3 Arabidopsis thaliana
Q9Z330 1.32e-05 51 23 7 222 1 Dnmt1 DNA (cytosine-5)-methyltransferase 1 Rattus norvegicus
P26358 1.36e-05 51 23 7 222 1 DNMT1 DNA (cytosine-5)-methyltransferase 1 Homo sapiens
Q92072 3.07e-05 50 22 7 222 1 DNMT1 DNA (cytosine-5)-methyltransferase 1 Gallus gallus
Q7YS61 4.99e-05 48 24 9 221 2 TRDMT1 tRNA (cytosine(38)-C(5))-methyltransferase Bos taurus
O14717 0.000132 47 24 6 193 1 TRDMT1 tRNA (cytosine(38)-C(5))-methyltransferase Homo sapiens

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10225
Feature type CDS
Gene -
Product DNA cytosine methyltransferase
Location 154934 - 156055 (strand: -1)
Length 1122 (nucleotides) / 373 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_415
Orthogroup size 8
N. genomes 6

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Genomic region

Domains

PF00145 C-5 cytosine-specific DNA methylase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0270 Replication, recombination and repair (L) L DNA-cytosine methylase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00558 DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] Cysteine and methionine metabolism
Metabolic pathways
MicroRNAs in cancer		 Methionine degradation

Protein Sequence

MKKHPEDAPFRQSAKDECTFTFIDLFAGIGGIRLPFQKQGGRCVFTSEWDKFAQRTYLANFGDLPNGDITQIAAKDIPDHDVLLGGFPCQAFSQAGFRQGFNDTRGTMFFEIQRIMTEKKPKAFLLENVKQLRGHDGGRTLQTILDILRGTHEQAVPDHIPLSEEARTALSEKLNYWVDFRVLRAADFGIPQNRERIFIVGFDRNQFPDADFDTLFSWPEPSHTPTRLGNILQSNKTLADDALQYKKDRFTISDKLWEGHQKRKKEHKERGNGFGYCLFNENSEYTNTLSARYYKDGSEILIDQSNAGKNPRKLTPRECADLQGFPADYIINAVSQGQIYKQFGNSVCMTVVDAIAEKLTSALKSAGSFHLKK

Flanking regions ( +/- flanking 50bp)

GATAAAACCGGCGCACTGCCCGGCGGCTGTTTACCGAACCGGAGATTACATTGAAAAAACACCCTGAGGACGCCCCTTTCCGGCAGTCAGCAAAAGATGAATGCACATTCACCTTTATTGACCTGTTCGCCGGTATCGGCGGGATCCGCCTTCCCTTTCAGAAACAGGGCGGACGCTGTGTTTTCACCTCAGAATGGGATAAATTTGCCCAGCGCACCTATCTGGCCAATTTCGGTGATCTGCCCAACGGTGATATCACACAGATAGCCGCAAAAGATATTCCGGATCATGATGTACTGCTCGGCGGTTTTCCCTGCCAGGCATTCTCTCAGGCGGGATTCCGTCAGGGATTTAATGACACGCGCGGAACTATGTTCTTTGAAATTCAGCGCATCATGACAGAAAAAAAACCAAAAGCGTTTCTGCTCGAAAATGTAAAACAACTGCGCGGACATGATGGCGGGCGCACATTACAAACCATTCTCGATATCCTGCGCGGCACACACGAACAAGCCGTACCGGATCATATTCCGCTGAGTGAAGAAGCCCGCACAGCACTGTCTGAAAAACTCAATTACTGGGTGGATTTCCGTGTACTGCGTGCCGCAGACTTTGGTATTCCGCAGAACCGGGAACGTATTTTTATTGTTGGTTTTGATCGCAACCAATTCCCGGATGCTGATTTCGACACCTTATTTTCCTGGCCTGAACCAAGCCATACCCCTACCAGGCTCGGCAATATTCTGCAAAGTAATAAAACACTGGCAGACGATGCTCTGCAATATAAAAAAGACCGCTTTACCATCTCGGATAAATTATGGGAAGGGCATCAGAAACGGAAAAAAGAACATAAAGAGCGGGGCAACGGGTTCGGTTATTGCTTATTTAATGAAAATAGCGAATATACCAATACACTCAGCGCCCGTTATTATAAAGACGGCTCAGAGATTTTGATTGACCAGTCGAACGCAGGTAAAAACCCACGAAAACTCACTCCCCGGGAATGTGCTGACCTTCAGGGATTTCCGGCTGATTATATTATCAATGCTGTTTCACAGGGGCAGATATATAAACAGTTTGGTAACTCTGTCTGTATGACCGTCGTCGATGCTATCGCTGAAAAATTAACTTCCGCACTAAAATCTGCCGGTTCTTTTCACCTGAAAAAATAAAAATATCGATGGGATATAACTCTGTATATTTAATACAGAGTTATATCTGC