Homologs in group_415

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18070 FBDBKF_18070 47.3 Morganella morganii S1 dcm DNA-cytosine methylase
EHELCC_16770 EHELCC_16770 47.3 Morganella morganii S2 dcm DNA-cytosine methylase
NLDBIP_17680 NLDBIP_17680 47.3 Morganella morganii S4 dcm DNA-cytosine methylase
LHKJJB_17600 LHKJJB_17600 47.3 Morganella morganii S3 dcm DNA-cytosine methylase
HKOGLL_17415 HKOGLL_17415 47.3 Morganella morganii S5 dcm DNA-cytosine methylase
F4V73_RS02270 F4V73_RS02270 30.8 Morganella psychrotolerans - DNA cytosine methyltransferase
F4V73_RS10225 F4V73_RS10225 48.2 Morganella psychrotolerans - DNA cytosine methyltransferase

Distribution of the homologs in the orthogroup group_415

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_415

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P05101 0.0 821 82 0 468 1 ecoRIIM Type II methyltransferase M.EcoRII Escherichia coli
P0AED9 0.0 615 67 0 444 1 dcm DNA-cytosine methyltransferase Escherichia coli (strain K12)
P0AEE0 0.0 615 67 0 444 3 dcm DNA-cytosine methyltransferase Escherichia coli O157:H7
P34877 1.32e-84 268 41 19 424 3 scrFIAM Type II methyltransferase M1.ScrFI Lactococcus lactis subsp. cremoris
P34879 1.1e-82 263 41 17 429 3 ssoIIM Type II methyltransferase M.SsoII Shigella sonnei
P50185 8.83e-79 252 42 12 372 3 dsaVm Type II methyltransferase M.DsaV Dactylococcopsis salina
P24581 1.13e-77 248 41 13 382 3 nlaXM Type II methyltransferase M.NlaX Neisseria lactamica
P15446 1.97e-64 215 38 17 379 1 hpaIIM Type II methyltransferase M.HpaII Haemophilus parainfluenzae
P17044 7.7e-58 199 39 19 373 1 hsdFM Type II methyltransferase M.BsuFI Bacillus subtilis
P11408 1.81e-52 185 36 15 383 3 mspIM Type II methyltransferase M.MspI Moraxella sp.
P05102 2.95e-52 182 35 17 371 1 hhaIM Type II methyltransferase M.HhaI Haemophilus parahaemolyticus
Q59603 3.47e-47 168 35 15 370 3 ngoBIM Type II methyltransferase M.NgoBI Neisseria gonorrhoeae
O30868 2.99e-46 166 36 16 365 3 haeIIM Type II methyltransferase M.HaeII Haemophilus aegyptius
P43420 2.27e-41 153 32 15 380 3 bsp6IM Type II methyltransferase M.Bsp6I Bacillus sp. (strain RFL6)
Q59605 3.29e-35 139 42 9 211 3 ngoBVM Type II methyltransferase M.NgoBV Neisseria gonorrhoeae
P50182 4.86e-35 138 42 9 211 3 nlaIVM Type II methyltransferase M.NlaIV Neisseria lactamica
P19888 1.18e-30 126 39 7 202 1 banIM Type II methyltransferase M.BanI Aneurinibacillus aneurinilyticus
P19888 3.2e-05 50 50 1 52 1 banIM Type II methyltransferase M.BanI Aneurinibacillus aneurinilyticus
P25263 1.64e-30 125 39 7 205 1 hgiCIM Type II methyltransferase M.HgiCI Herpetosiphon aurantiacus
P25263 3.38e-07 56 56 1 50 1 hgiCIM Type II methyltransferase M.HgiCI Herpetosiphon aurantiacus
P25262 3.36e-30 125 34 7 211 3 hgiBIM Type II methyltransferase M.HgiBI Herpetosiphon aurantiacus
P25266 6.93e-30 124 34 7 211 3 hgiEIM Type II methylase M.HgiEI Herpetosiphon aurantiacus
P25264 1.19e-25 112 31 6 205 3 hgiCIIM Type II methyltransferase M.HgiCII Herpetosiphon aurantiacus
P68586 1.42e-25 112 25 16 464 3 mtbP Orphan methyltransferase M.Phi3TI Bacillus phage phi3T
P68585 1.42e-25 112 25 16 464 3 mtbP Putative type II methyltransferase M.BsuMIIP Bacillus subtilis (strain 168)
P09389 1.42e-25 112 25 16 464 3 mtbP Orphan methyltransferase M.SPBetaI Bacillus phage SPbeta
P00476 1.73e-25 111 34 8 213 3 None Orphan methyltransferase M.SPRI Bacillus phage SPR
P00476 2.75e-06 53 46 2 62 3 None Orphan methyltransferase M.SPRI Bacillus phage SPR
P09915 8.19e-25 110 34 7 205 3 None Orphan methyltransferase M.Rho11sI Bacillus phage rho11s
P09915 1.8e-05 50 43 2 60 3 None Orphan methyltransferase M.Rho11sI Bacillus phage rho11s
P31974 6.87e-24 107 35 7 202 3 aluIM Type II methyltransferase M.AluI Cellulosimicrobium cellulans
O33481 1.01e-23 106 29 16 391 3 pspPIM Type II methyltransferase M.PspPI Psychrobacter sp. (strain TA137)
P50196 1.34e-21 100 27 17 388 3 eco47IIM Type II methyltransferase M.Eco47II Escherichia coli
Q59606 1.44e-20 96 27 13 379 3 ngoFVIIM Type II methyltransferase M.NgoFVII Neisseria gonorrhoeae
P50192 2.42e-20 95 33 9 203 3 hphIAM Type II methyltransferase M1.HphI Haemophilus parahaemolyticus
P34878 4.17e-19 92 29 13 305 3 scrFIBM Type II methyltransferase M2.ScrFI Lactococcus lactis subsp. cremoris
P23737 1.24e-18 91 28 11 317 1 sau96IM Type II methyltransferase M.Sau96I Staphylococcus aureus
P08455 3.63e-17 85 24 16 405 3 ngoPIIM Type II methyltransferase M.NgoPII Neisseria gonorrhoeae
P34906 7.41e-17 85 24 16 414 3 fnuDIM Type II methyltransferase M.FnuDI Fusobacterium nucleatum
P29567 2.37e-15 80 25 14 395 1 mthTIM Type II methyltransferase M.MthTI Methanothermobacter thermautotrophicus
P20589 5.82e-15 79 23 15 386 1 haeIIIM Type II methyltransferase M.HaeIII Haemophilus aegyptius
P16668 9.63e-15 79 28 8 208 3 sau3AIM Type II methyltransferase M.Sau3AI Staphylococcus aureus
P52311 4e-14 77 25 14 391 3 xorIIM Type II methyltransferase M.XorII Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85)
P0DW08 4.85e-14 77 28 9 246 1 drmMII Type II methyltransferase M.Bpa9945I Bacillus paralicheniformis (strain ATCC 9945a / NCIMB 11709 / CD-2)
P45000 6.3e-14 75 31 11 217 3 hindVM Type II methyltransferase M.HindV Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
D4ZX35 1.39e-13 75 26 17 367 1 aplIM Type II methyltransferase M.AplI Arthrospira platensis (strain NIES-39 / UTEX 3086 / IAM M-135)
P34882 6.48e-13 72 30 9 201 1 aquIMA Type II methyltransferase M.AquIA Picosynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)
P05302 1.06e-12 73 26 6 206 1 ddeIM Type II methyltransferase M.DdeI Desulfomicrobium norvegicum (strain DSM 1741 / NCIMB 8310)
P10283 1.18e-12 73 28 13 295 1 bepIM Type II methyltransferase M.BepI Brevibacterium epidermidis
P13906 2.65e-12 72 25 8 236 1 bspRIM Type II methyltransferase M.BspRI Lysinibacillus sphaericus
P36216 6.09e-12 70 31 10 223 3 CVIJIM Type II methyltransferase M.CviJI Paramecium bursaria Chlorella virus IL3A
P06530 8.17e-11 67 24 6 231 1 hsdRM Type II methyltransferase M.BsuRI Bacillus subtilis
O23273 9.4e-11 68 28 10 240 1 MET4 DNA (cytosine-5)-methyltransferase 4 Arabidopsis thaliana
Q9YDP3 2.56e-10 66 28 10 253 1 APE_0872.1 DNA (cytosine-5-)-methyltransferase M.ApeKI Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
P34905 5.02e-10 64 27 8 214 3 bbvIM Type II methyltransferase M.BbvI Brevibacillus brevis
P24600 5.49e-10 63 28 7 198 3 hgiDIM Type II methyltransferase M.HgiDI Herpetosiphon aurantiacus
P94147 5.54e-10 64 26 6 203 3 ageIM Type II methyltransferase M.AgeI Thalassovita gelatinovora
Q27746 1.96e-09 63 25 10 235 2 DNMT DNA (cytosine-5)-methyltransferase PliMCI Paracentrotus lividus
Q9M0S8 2.51e-09 63 27 10 236 2 MET2 DNA (cytosine-5)-methyltransferase 2 Arabidopsis thaliana
P50188 2.8e-09 62 23 13 371 3 naeIM Type II methyltransferase M.NaeI Lentzea aerocolonigenes
O34680 3.45e-09 62 27 6 198 1 ydiP Type II methyltransferase M2.BsuMI Bacillus subtilis (strain 168)
Q8EL95 2.09e-08 60 24 5 202 3 OB3336 Putative type II methyltransferase M.OihORF3336P Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
P25267 2.42e-08 55 29 5 142 3 hgiGIM Type II methyltransferase M.HgiGI (Fragment) Herpetosiphon aurantiacus
P25265 7.73e-08 57 22 7 201 3 hgiDIIM Type II methylase M.HgiDII Herpetosiphon aurantiacus
B1Q3J6 1.2e-06 55 27 8 195 2 MET1B DNA (cytosine-5)-methyltransferase 1B Oryza sativa subsp. japonica
P34881 1.22e-06 55 27 9 221 1 DMT1 DNA (cytosine-5)-methyltransferase 1 Arabidopsis thaliana
Q92072 1.58e-06 54 24 10 220 1 DNMT1 DNA (cytosine-5)-methyltransferase 1 Gallus gallus
O34939 1.66e-06 53 23 15 350 1 ydiO Type II methyltransferase M1.BsuMI Bacillus subtilis (strain 168)
O31073 3.62e-06 52 25 4 173 3 sacIM Type II methyltransferase M.SacI Streptomyces achromogenes
Q9Z330 3.65e-06 53 22 7 201 1 Dnmt1 DNA (cytosine-5)-methyltransferase 1 Rattus norvegicus
P13864 3.77e-06 53 22 7 201 1 Dnmt1 DNA (cytosine-5)-methyltransferase 1 Mus musculus
Q7Y1I7 7.52e-06 52 25 8 205 2 MET1A DNA (cytosine-5)-methyltransferase 1A Oryza sativa subsp. japonica
Q24K09 8.11e-06 52 23 7 199 1 DNMT1 DNA (cytosine-5)-methyltransferase 1 Bos taurus
P26358 1.1e-05 52 21 5 198 1 DNMT1 DNA (cytosine-5)-methyltransferase 1 Homo sapiens
Q9RLM4 9.04e-05 48 23 16 382 3 nmeDIMP Type II methyltransferase M.NmeDI Neisseria meningitidis serogroup C
Q54JH6 0.001 45 23 5 173 1 dnmA DNA (cytosine-5)-methyltransferase Dictyostelium discoideum

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10160
Feature type CDS
Gene -
Product DNA cytosine methyltransferase
Location 142993 - 144420 (strand: 1)
Length 1428 (nucleotides) / 475 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_415
Orthogroup size 8
N. genomes 6

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Genomic region

Domains

PF00145 C-5 cytosine-specific DNA methylase
PF18284 DNA methylase N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0270 Replication, recombination and repair (L) L DNA-cytosine methylase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00558 DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] Cysteine and methionine metabolism
Metabolic pathways
MicroRNAs in cancer		 Methionine degradation

Protein Sequence

MSEFELLAQDLLQKSGEEEKHRQEKDTKLITKVLEIYDQKYVAELLRKVGKNEWSRETLNRWVNGKCAPKLLTSAEETLLKKMLPEPPEHHPNYTFRFIDLFAGIGGIRKGFESIGGHCVFTSEWNEYAVRTYKANWFNDELEHKFNHDIREITLSDDTEVSEAEAYKHIDKEIPDHDVLLAGFPCQPFSLAGVSKKNSMGRAHGFECEAQGTLFFDVARIIKSKKPSIFVLENVKNLKSHDKGKTFKVIMDTLDELGYEVADAGISGSADPKIIDGKHFLPQHRERIVLVGFRRDLKLHEGFTLRDISRFYPENRQTFGGLLEPIVDSKYILTPKLWEYLYNYAKKHAAKGNGFGFGLVDPNDAHSVARTLSARYHKDGSEILIDRGWDKTKGEVDFSDENNQIHRPRRLTPRECARLMGFEKIGEKPFRIPVSDTQSYRQFGNSVIVPVFEAVAKLLESYIIKSVSIREKTKN

Flanking regions ( +/- flanking 50bp)

TGGGTCGAATGAGTGATAAGGTATCACCAATAAGACCCATTGGAGGTGCTATGTCAGAATTTGAATTACTCGCTCAGGATCTTCTCCAAAAATCCGGAGAGGAAGAAAAGCACCGGCAGGAAAAAGATACAAAACTCATCACTAAAGTTCTGGAGATTTATGATCAGAAGTATGTTGCTGAGTTGCTGAGAAAAGTCGGTAAAAATGAGTGGAGCAGAGAAACACTTAATCGCTGGGTCAACGGAAAGTGTGCTCCGAAATTATTAACTTCTGCTGAAGAGACTTTGCTTAAAAAGATGCTTCCGGAACCTCCGGAACACCATCCAAATTATACTTTTCGGTTTATCGACTTATTTGCCGGTATTGGCGGTATCCGTAAAGGATTTGAGTCGATTGGTGGTCATTGTGTATTTACCAGCGAATGGAATGAATATGCTGTACGTACTTATAAGGCCAACTGGTTTAATGATGAGCTGGAACACAAGTTTAACCACGATATTCGCGAAATTACACTGAGTGATGATACTGAAGTATCTGAAGCTGAAGCTTATAAGCATATAGATAAAGAAATTCCTGACCACGATGTGTTACTGGCAGGCTTTCCTTGCCAGCCTTTTAGTCTGGCAGGCGTCAGTAAAAAAAACTCCATGGGACGTGCTCATGGTTTTGAATGTGAAGCTCAGGGAACATTATTCTTTGATGTCGCCAGAATTATTAAATCAAAGAAACCAAGTATCTTTGTATTAGAGAATGTTAAGAATCTAAAAAGTCATGATAAAGGAAAAACCTTCAAAGTCATCATGGATACACTCGATGAGTTAGGCTATGAAGTAGCGGATGCAGGAATTTCCGGTTCTGCTGATCCTAAAATTATTGATGGTAAGCATTTCCTTCCTCAACACAGGGAACGAATTGTATTAGTTGGATTCCGCCGTGATCTGAAGCTTCATGAAGGATTTACGCTGCGTGACATAAGTCGTTTTTATCCTGAAAATAGACAGACATTTGGCGGGTTATTGGAACCGATTGTTGATAGTAAATATATTTTGACTCCTAAGCTTTGGGAATATCTTTATAATTATGCCAAAAAGCATGCAGCTAAAGGTAATGGCTTTGGATTTGGACTTGTTGATCCTAATGATGCTCATAGTGTTGCCCGTACTTTATCAGCCCGTTATCACAAAGATGGCTCAGAAATACTGATTGACAGAGGTTGGGATAAAACTAAGGGTGAGGTCGATTTTAGTGATGAAAATAATCAGATTCATCGACCAAGACGATTAACTCCACGGGAATGTGCACGATTAATGGGGTTTGAAAAAATAGGTGAGAAGCCATTCAGAATACCTGTTTCTGATACTCAATCTTATCGTCAATTTGGGAATTCAGTTATTGTTCCTGTATTTGAAGCTGTCGCTAAATTACTTGAATCATATATTATTAAGTCAGTTTCAATCAGAGAGAAAACAAAAAATTAATAACATTAATCTCCGGTTTAATATGCCGGAGATTATTCTATATGCTATTA